Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1475 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score =  103 bits (257), Expect = 7e-26
 Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 34/348 (9%)

Query: 65  QYSALENVRIGKNILLTTSTASGKTLSFNLPILETLQND-------KDAT-ALYIYPTKA 116
           Q +A   +R G++ L+   T SGKTL+  L  ++ L           DAT  LY+ P KA
Sbjct: 54  QAAAWPLIRAGRSTLVAAPTGSGKTLTAFLAAIDGLVQQGLAEGGLADATRVLYVSPLKA 113

Query: 117 LTNDQLNNLKN----LENELN------ITLKPEIYDGDTPNSKRKSIREK-SRIILTNPH 165
           L+ND   NL+     +  EL       + ++  +  GDTP ++R ++R++   I++T P 
Sbjct: 114 LSNDIHINLEEPLAGITAELARLGLPPLEIRTAVRTGDTPQAERNAMRKRVPHILVTTPE 173

Query: 166 ELHQVLQYNPKWMSFFKNLKYIVIDEAHTYRG-IFGSNISFLIRRLRRICEDYGSYPQF- 223
            L+ VL  +        +++ +++DE H   G   GS+++  + RL  +C    + P   
Sbjct: 174 SLY-VLLSSASGREMLADVQSVIVDEIHAIAGNKRGSHLALSLERLEALC----NRPLVR 228

Query: 224 ILASATLANAKEFSEKLVGLD--FRVID-KDGSPKNKKYFVFYNTLKNEISESSWYSSAI 280
           +  SAT       +  L G++    ++D   G  ++    V    L+  +S  +W     
Sbjct: 229 VGLSATQKPIDAVARFLAGVERPCEIVDIGHGRARDLALEVPSVPLEAVMSNDAWALVYD 288

Query: 281 NILELCMKYGLQTIGFTLSRKMAELITIWTKKSLGNNILSRKISSYRSGFTPEERRDIES 340
            +  L  ++   T+ F  +R+MAE  T    + LG  +    ++++      E+R   E 
Sbjct: 289 RLAALAGEH-RTTLVFVNTRRMAERTTRHLAERLGAEV----VAAHHGSLAREQRLSAEQ 343

Query: 341 RLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRAG 388
           +LK G+LR + +T +LE+GIDIG ++ V   G P ++ +  Q+ GRAG
Sbjct: 344 KLKRGELRVLVATASLELGIDIGDVELVCQLGSPRSISAFLQRVGRAG 391