Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 849 a.a., DNA damage response helicase, ligase-associated (from data) from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 8e-26
 Identities = 105/363 (28%), Positives = 160/363 (44%), Gaps = 31/363 (8%)

Query: 44  LDLPDNFEEYLLKKNKKLYTHQYSALENVRIGKNILLTTSTASGKTLSFNLPILETLQND 103
           L LP  F  +  +K  +   HQ   L     G++ LL   T +GKTL+  LP L  +   
Sbjct: 17  LTLPAPFLRWFAEKGWRPRAHQLELLSRAEAGESTLLIAPTGAGKTLAGFLPSLVDITRR 76

Query: 104 ---------KDATALYIYPTKALTNDQLNNLKNLENELNITLKPEIYDGDTPNSKRKSIR 154
                         LYI P KAL  D   NL     E+ + +  E   GDTP  KR+  R
Sbjct: 77  GRIPPGAPFTGIHTLYISPLKALAVDIERNLMKPVGEMGLPVSIENRTGDTPQGKRQ--R 134

Query: 155 EKSR---IILTNPHELHQVLQYNPKWMSFFKNLKYIVIDEAHT-YRGIFGSNISFLIRRL 210
           +K     I+LT P +L  +L  N +   FFK+L+Y+V+DE H+      G  +S  + RL
Sbjct: 135 QKLNPPDILLTTPEQLALLLA-NGEAERFFKDLRYVVLDELHSLVMSKRGHLLSLGLARL 193

Query: 211 RRICEDYGSYPQFILASATLANAKEFSEKLVGLDFR------VIDKDGSPKNKKYFVFYN 264
           RR+        Q +  SAT+A+  +    LV           +I   G  K +   +   
Sbjct: 194 RRLAPRL----QTMGLSATVADPMDLQRWLVAQFLAKENHAGLITVSGGAKPEISILRTE 249

Query: 265 TLKNEISESSWYSSAINILELCMKYGLQTIGFTLSRKMAELITIWTKKSLGNNILSRKIS 324
                   S+ Y  AI  +   +K    T+ F  +R  AE++     K   +++    I+
Sbjct: 250 NQVPWAGHSARY--AIPDVYAAIKEHRTTLLFVNTRSQAEMLFQELWKINDDDL---PIA 304

Query: 325 SYRSGFTPEERRDIESRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQA 384
            +       +RR +E+ +    LRAV +T+ L++GID G +D V+  G P     L Q+ 
Sbjct: 305 LHHGSLDVAQRRRVEAAMAENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI 364

Query: 385 GRA 387
           GRA
Sbjct: 365 GRA 367