Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 811 a.a., DNA damage response helicase, ligase-associated (from data) from Phaeobacter inhibens DSM 17395

 Score = 94.4 bits (233), Expect = 2e-23
 Identities = 91/348 (26%), Positives = 147/348 (42%), Gaps = 17/348 (4%)

Query: 46  LPDNFEEYLLKKNKKLYTHQYSALENVRIGKNILLTTSTASGKTLSFNLPILETLQ--ND 103
           LPD   ++   +   ++ HQ   L  V     +L+   T  GKT++  LP L  L   + 
Sbjct: 4   LPDVITDWFSTRGWTIHPHQQEMLARVDDPATLLIAP-TGGGKTMAGFLPTLADLATGDH 62

Query: 104 KDATALYIYPTKALTNDQLNNLKNLENELNITLKPEIYDGDTPNSKRKSIR-EKSRIILT 162
           +    LY+ P KAL  D   NL+    ++ + ++ +   GDTP S+++S R +   I+LT
Sbjct: 63  QGLHTLYVSPLKALAADIKRNLRTPVEDMGLPIRIDDRTGDTPASRKRSQRADPPHILLT 122

Query: 163 NPHELHQVLQYNPKWMSFFKNLKYIVIDEAHTY-RGIFGSNISFLIRRLRRICEDYGSYP 221
            P  L  +  Y       F  LK +V+DE H       G  +   + RL+ IC D     
Sbjct: 123 TPESLALLTSYEDA-PRMFAGLKRVVLDEIHALAESKRGDQLMLALTRLQAICPDMRRVG 181

Query: 222 QFILASATLANAKEFSEKLVGLDFRVIDKDGSPKNKKYFVFYNTLKNEISESSWYSSAIN 281
                    A A+  +      D  + D   +P  +      +T           + AI 
Sbjct: 182 LSATVDDPAAIAQYLARHPAPCDIVLADPGPAPDIR----MLHTDAAPPWAGGGAAHAIP 237

Query: 282 ILELCMKYGLQTIGFTLSRKMAELI--TIWTKKSLGNNILSRKISSYRSGFTPEERRDIE 339
            +   +K    T+ F  +R  AE+    +W       N  +  I  +       +R  +E
Sbjct: 238 AVLEQIKAHRTTLIFHNTRAQAEIFFRNLWLA-----NDDALPIGIHHGSLDRVQRDRVE 292

Query: 340 SRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRA 387
           + +  G+LRAV  T +L++GID G +D VI  G P  +  L Q+ GRA
Sbjct: 293 AAMVRGELRAVVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRA 340