Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 81.6 bits (200), Expect = 8e-20
 Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 48/361 (13%)

Query: 59  KKLYTHQYSALENVRIGKNILLTTSTASGKTLSFNLPILETLQNDKDAT------ALYIY 112
           +K+   Q  A+  +R G+++L +  T +GKT +F LPIL+ + +    T      AL + 
Sbjct: 22  QKMTPIQKEAIPAIRRGQDVLASAQTGTGKTAAFALPILQKMFDSPSDTQRSNTRALILA 81

Query: 113 PTKALTNDQLNNLKNLENELNITLKPEIYDGDTPNSKRKSIREKSRIILTNPHELHQVLQ 172
           PT+ L     +N+K     L I++   +Y G   +++   +++ + II+  P  L + LQ
Sbjct: 82  PTRELVAQVADNIKQYSRYLPISVLT-VYGGVKMDTQAAKVKKGADIIVATPGRLLEHLQ 140

Query: 173 YNPKWMSFFKNLKYIVIDEAHTYRGIFGSNISFLIRRLRRICEDYGSYPQFILASATLAN 232
                +S   N+ ++V+DEA     +        I  +++I +      Q +L SAT ++
Sbjct: 141 ACNLNLS---NVDFLVLDEADRMLDMG------FITDIQKILQQVNRDRQNLLFSATFSS 191

Query: 233 AKE--FSEKLVGLDFRVIDKDGSPKNKKYFVFY--------NTLKNEISESSWYSSAINI 282
           A +   +E LV      +DK  +       V Y          L   I + +W       
Sbjct: 192 AVKQLANEMLVKPKLIAVDKQNTTAVTVSQVVYPVEQRRKRELLSELIGKKNWQ------ 245

Query: 283 LELCMKYGLQTIGFTLSRKMAELITIWTKKSLGNNILSRKISSYRSGFTPEERRDIESRL 342
                    Q + FT +R+ A+++    K+   + I S  + S ++      RR      
Sbjct: 246 ---------QVLVFTATREAADVLV---KELNLDGIPSAVVHSEKA---QGNRRRALREF 290

Query: 343 KNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRAGRAGYDSV-VTLLSR 401
           K G +RA+ +T     G+DI  L+ V+ +  P        + GR GRAG   V ++L+SR
Sbjct: 291 KEGKVRALVATEVAARGLDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSR 350

Query: 402 E 402
           E
Sbjct: 351 E 351