Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (341), Expect = 4e-36
 Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 14/388 (3%)

Query: 337 DYKTTVK-TGDELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDF 395
           D KT V  +G +L +L++ F+K   ++++           +   L  V   +  VA    
Sbjct: 151 DMKTVVDGSGKQLNDLAELFSKQV-SIESQKSQEHYANSRMVVSLFVVFAALATVALAML 209

Query: 396 TARADESRENNNLEKAINTAVSNVADLIK-----ELREEVELLNIQIQKVEDELKGAEET 450
             R+        L  A N A  ++   I+     E+   ++ L    Q + + L+G   +
Sbjct: 210 LTRSIVKPLGEALNAAENVARGDLTRPIETHGNDEVSRLLKALAAMQQNLRETLQGISGS 269

Query: 451 ATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEET----VKSSEEIKEN 506
           A Q+A AA ++     D +  LQ+ + E+E       E+ +A EE     V +S+  +++
Sbjct: 270 AAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMTTAVEEVARNAVSTSDATRQS 329

Query: 507 SET---GVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLA 563
           SE+   G ++V + +  + ++ + +   G  ++ L    + I +V  +I+ IAEQT LLA
Sbjct: 330 SESASLGQQRVSDTVDAIGALASDVQVTGGLVQSLANQSQDIGKVLDVIRAIAEQTNLLA 389

Query: 564 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGK 623
           LNA+IEAARAG++G+GFAVVA E+++LA   ++S ++I   ++G+       +D      
Sbjct: 390 LNAAIEAARAGESGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRSGATQALDSMQASS 449

Query: 624 DEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSE 683
                 +   +   DAL  I  SVNE   +   I   A+  ++      +N   I  LS 
Sbjct: 450 SRAASTLAMAERAGDALQTITASVNEIHERNLVIASAAEEQAQVAREVDRNLVNIRDLSV 509

Query: 684 EFTATAEEVTASTEELNSIIEEIRGIAE 711
              + A++ +AS+ EL+ +   +R + +
Sbjct: 510 RSASGADQTSASSHELSQLANSLRTMVQ 537



 Score = 33.9 bits (76), Expect = 2e-05
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query: 662 QNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVT 721
           QN  E  +G   +A ++A  ++E  A   + T S ++ N+ IE+      E+T   E V 
Sbjct: 257 QNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVTEMTTAVEEVA 316

Query: 722 KKS 724
           + +
Sbjct: 317 RNA 319