Pairwise Alignments
Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2
Score = 122 bits (305), Expect = 6e-32
Identities = 92/384 (23%), Positives = 182/384 (47%), Gaps = 26/384 (6%)
Query: 340 TTVKTGDELQELSDSFNKM-AENVKNLMKTM-----DMDKVELATLLTNVSDVMNRVAKG 393
T +K G +L + + NK+ A NV ++ D ++ ++S + V
Sbjct: 150 TRIKEGTDL--MGEQLNKLIAINVAGASESSAKAGEHYDSAITGIIIVSISAALATVVLA 207
Query: 394 DFTARADESRENNNLEKAINTAVSNVADLIKE--------LREEVELLNIQIQKVEDELK 445
R+ + N LE A A N+ +I + L + + + + +++ +++
Sbjct: 208 LLLTRSIVAPLNRALEAARTIASGNLVQVIADDGKDEPGRLLQALATMQVSLRQTIEQIA 267
Query: 446 GAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEE-------TVK 498
G+ ATQ+ AA +++ + S LQ+ E+E E+ +A EE T +
Sbjct: 268 GS---ATQLGAAAQELSAVTQESSRGLQQQHNEIEQAATAVNEMTAAVEEVARNAVSTSE 324
Query: 499 SSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQ 558
+S + + ++ G +V + +Q++T+ + I+ L G+ I +V +I+ IAEQ
Sbjct: 325 ASNQSTQAAQEGRTRVVETVDAIQTMTHDVQATASMIEGLAVQGRDIGKVLDVIRAIAEQ 384
Query: 559 TGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDL 618
T LLALNA+IEAARAG+AG+GFAVVA E+++LA +S ++I + G+ +
Sbjct: 385 TNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEKMVAGIQNGTGQAVQS 444
Query: 619 GLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEI 678
+ + AL +I +S+++ + I ++ ++ + +N I
Sbjct: 445 MQQSNQRTQSTLEMARAAGVALEQITQSIHQINERNLVIASASEEQAQVSREVDRNLVNI 504
Query: 679 AALSEEFTATAEEVTASTEELNSI 702
L+ + + A++ + +T EL+ +
Sbjct: 505 RDLATQSASGAKQTSDATHELSRL 528
Score = 34.7 bits (78), Expect = 1e-05
Identities = 69/354 (19%), Positives = 143/354 (40%), Gaps = 52/354 (14%)
Query: 408 LEKAINTAVSNVADLIKE-LREEVELLNIQIQKVEDELKGAEETATQVAEA-----ATQV 461
+E+ +V +A++++ LR + I + + L AE + E ++
Sbjct: 44 MEQTQVPSVGYLANVLENVLRMRILSFRILVNRDPASLTEAESRIGVLVEKLNKANSSYA 103
Query: 462 AEAASDQSAKLQES-SEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISR 520
A ++ Q A+L + S LE + KE+ + + ++E++ + T +++ + +
Sbjct: 104 ALPSTPQEAELYKVFSATLEKYLQAQKEMLDLSRQN--KADELRTHINTRIKEGTDLMGE 161
Query: 521 MQSITNVIDELGKSIKMLGEDGKKINEVTGLIK---DIAEQTGLLAL----------NAS 567
+ I+ G S + +TG+I A T +LAL N +
Sbjct: 162 QLNKLIAINVAGASESSAKAGEHYDSAITGIIIVSISAALATVVLALLLTRSIVAPLNRA 221
Query: 568 IEAARAGDAGKGFAVVASEIKS----LAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGK 623
+EAAR +G V+A + K L + + + TIE + LG +
Sbjct: 222 LEAARTIASGNLVQVIADDGKDEPGRLLQALATMQVSLRQTIEQI---AGSATQLGAAAQ 278
Query: 624 D------EVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQE 677
+ E +G + + ++ + + +VNE + + A + SE + + + AQE
Sbjct: 279 ELSAVTQESSRG---LQQQHNEIEQAATAVNEMTAAVEEVARNAVSTSEASNQSTQAAQE 335
Query: 678 -----------IAALSEEFTATA---EEVTASTEELNSIIEEIRGIAEEVTQVA 717
I ++ + ATA E + ++ +++ IR IAE+ +A
Sbjct: 336 GRTRVVETVDAIQTMTHDVQATASMIEGLAVQGRDIGKVLDVIRAIAEQTNLLA 389
Score = 33.9 bits (76), Expect = 2e-05
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 42/257 (16%)
Query: 486 AKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSIT--NVIDELGKSIKMLGEDGK 543
A Y+A T + +E K S T +EK A M ++ N DEL I
Sbjct: 98 ANSSYAALPSTPQEAELYKVFSAT-LEKYLQAQKEMLDLSRQNKADELRTHINT------ 150
Query: 544 KINEVTGLIKDIAEQTGLLALN---ASIEAARAG---DAGKGFAVVASEIKSLAEEI--- 594
+I E T L+ + + L+A+N AS +A+AG D+ ++ S +LA +
Sbjct: 151 RIKEGTDLMGE--QLNKLIAINVAGASESSAKAGEHYDSAITGIIIVSISAALATVVLAL 208
Query: 595 ---KKSVEDINHTIEGVNKRIDDTID--LGLKGKDEVDKGVIAIDEVNDALLKIKESVNE 649
+ V +N +E + + GKDE + + A+ + +L + E +
Sbjct: 209 LLTRSIVAPLNRALEAARTIASGNLVQVIADDGKDEPGRLLQALATMQVSLRQTIEQIAG 268
Query: 650 SAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGI 709
SA ++ AQE++A+++E + ++ E+ + + E+
Sbjct: 269 SATQLGAA-----------------AQELSAVTQESSRGLQQQHNEIEQAATAVNEMTAA 311
Query: 710 AEEVTQVAERVTKKSSQ 726
EEV + A ++ S+Q
Sbjct: 312 VEEVARNAVSTSEASNQ 328