Pairwise Alignments
Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2
Score = 111 bits (278), Expect = 8e-29
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 45/348 (12%)
Query: 376 LATLLTNVSDVMNRVAK-GDFTARADESREN---------NNLEKAINTAVSNVADLIKE 425
L + L + DVM V K GD +AR + E+ N ++ V VA ++
Sbjct: 165 LLSQLNTLKDVMLHVEKTGDLSARVPLACEDEVGQMAAAFNAMQAGYQRVVDTVASTARQ 224
Query: 426 LREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEG 485
L L + V + G + Q A A +++ Y
Sbjct: 225 LDSGAARLASSMNDVRHGMLGQQSETDQAATAINEMSATV-----------------YHI 267
Query: 486 AKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKI 545
A+ A + K+++ + N V +V+ +I+ + S + + + I+ L ED +KI
Sbjct: 268 AQHA-GATRDLSKTADTLAGNGHDVVARVQQSITGLSS---GVQQTAEMIQRLAEDSQKI 323
Query: 546 NEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTI 605
N V +I IAEQT LLALNA+IEAARAG+ G+GFAVVA E+++LA+ ++ S ++I +
Sbjct: 324 NGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMV 383
Query: 606 EGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKI-------KESVNESAVKINGIK 658
+ D +D + + D V E DAL +I +ES + AV
Sbjct: 384 SALQAGTRDAVDFMQESSLKADDCVQQAREAGDALAQITAAVAQMRESNTQIAVAAEQQS 443
Query: 659 HGAQNAS-------ENTEGALKNAQEIAALSEEFTATAEEVTASTEEL 699
H A+ + + TE ++ + A S E A E++ + +L
Sbjct: 444 HVAEEMNRAVVSIRDVTENTVRQTVDSATTSHELATLAGELSKAIGQL 491
Score = 51.2 bits (121), Expect = 1e-10
Identities = 55/303 (18%), Positives = 124/303 (40%), Gaps = 23/303 (7%)
Query: 430 VELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEV 489
+ L Q+ ++D + E+T + + +V A D+ ++ + ++ Y+ V
Sbjct: 162 IRFLLSQLNTLKDVMLHVEKTG----DLSARVPLACEDEVGQMAAAFNAMQAGYQ---RV 214
Query: 490 YSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVT 549
T + + + + V + + QS T D+ +I + I +
Sbjct: 215 VDTVASTARQLDSGAARLASSMNDVRHGMLGQQSET---DQAATAINEMSATVYHIAQHA 271
Query: 550 GLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVED---INHTIE 606
G +D+++ LA N AR + G ++S ++ AE I++ ED IN +
Sbjct: 272 GATRDLSKTADTLAGNGHDVVARVQQSITG---LSSGVQQTAEMIQRLAEDSQKINGVVS 328
Query: 607 GVNKRIDDTIDLGLKGKDEVDKG-------VIAIDEVNDALLKIKESVNESAVKINGIKH 659
++ + T L L E + + DEV + +++ S +E ++ ++
Sbjct: 329 VIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVSALQA 388
Query: 660 GAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAER 719
G ++A + + + A + + E ++TA+ ++ +I AE+ + VAE
Sbjct: 389 GTRDAVDFMQESSLKADDCVQQAREAGDALAQITAAVAQMRESNTQIAVAAEQQSHVAEE 448
Query: 720 VTK 722
+ +
Sbjct: 449 MNR 451
Score = 48.5 bits (114), Expect = 8e-10
Identities = 60/333 (18%), Positives = 135/333 (40%), Gaps = 43/333 (12%)
Query: 295 IIIISLLG----LLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQE 350
++++++LG L+ +L L T + + +E+ G+ + + DE+ +
Sbjct: 149 VLMLAMLGASQLLIRFLLSQLNTLKDVMLHVEK---------TGDLSARVPLACEDEVGQ 199
Query: 351 LSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEK 410
++ +FN M + ++ T+ +L + ++ MN V G + E +
Sbjct: 200 MAAAFNAMQAGYQRVVDTVASTARQLDSGAARLASSMNDVRHG----MLGQQSETDQAAT 255
Query: 411 AINTAVSNVADLIKELREEVELLNIQIQKVEDELKG-AEETATQVAEAATQVAEAASDQS 469
AIN + V + + +L K D L G + +V ++ T ++ +
Sbjct: 256 AINEMSATVYHIAQHAGATRDL-----SKTADTLAGNGHDVVARVQQSITGLSSGVQQTA 310
Query: 470 AKLQESSEELENTYEGAKEVYSAAEET----VKSSEEIKENSETG------VEKVENAIS 519
+Q +E+ + ++S AE+T + ++ E E G ++V N
Sbjct: 311 EMIQRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAK 370
Query: 520 RMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKG 579
R+Q+ T+ I + +++ D D +++ L A + +A AGDA
Sbjct: 371 RVQTSTDEITTMVSALQAGTRDA----------VDFMQESSLKADDCVQQAREAGDALAQ 420
Query: 580 FAVVASEIKSLAEEIKKSVEDINHTIEGVNKRI 612
++++ +I + E +H E +N+ +
Sbjct: 421 ITAAVAQMRESNTQIAVAAEQQSHVAEEMNRAV 453