Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 676 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  133 bits (335), Expect = 3e-35
 Identities = 106/363 (29%), Positives = 176/363 (48%), Gaps = 52/363 (14%)

Query: 380 LTNVSDVMNRVAKGDFTARAD-ESREN-NNLEKAINTAVSNVADLIKELREEVELLNIQI 437
           L ++  +M++VA GD TAR   +SR+    L +  NT V+ V +LI+ + + V  ++ Q 
Sbjct: 353 LRSLGKIMDKVAAGDMTARYQVQSRDELGELGQVFNTTVAQVRELIERVGQTVAEVDRQA 412

Query: 438 QKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETV 497
           Q+VE     + +T ++      QVA A ++ SA               A+EV S+AE  V
Sbjct: 413 QRVESVSGESNQTVSEQRGQIEQVATAMNEMSAT--------------AQEVASSAEAAV 458

Query: 498 KSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAE 557
            S++ + E + +G   V   +  +Q + + I++  + I  L  D K I++V  +IK IAE
Sbjct: 459 GSAQSVNEETVSGRALVVAQVGGIQRLASEIEQSVQVINQLAGDSKAISQVLDVIKTIAE 518

Query: 558 QTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTID 617
           QT LLALNA+IEAARAG+ G+GFAVVA E++ LA+  +KS  +I   I  +   +     
Sbjct: 519 QTNLLALNAAIEAARAGEQGRGFAVVADEVRGLAQRTQKSTAEIEQMIARLQNGV----- 573

Query: 618 LGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGA----LK 673
                                A +K   + +  A    G     + A EN  GA    + 
Sbjct: 574 --------------------GAAVKTMHASHALAEDTVGQSGQVEQALENILGAVGLIVD 613

Query: 674 NAQEIAALSEEFTATAEEVTASTEELNSIIE-------EIRGIAEEVTQVAERVTKKSSQ 726
             Q+IAA +E+ TA A ++  +   +N   +            + E++Q+  R+ +  S 
Sbjct: 614 QNQQIAAAAEQQTAVAHDIDRNIVAINEAGQRTAEGAGHTEQASRELSQLVGRLQQLISA 673

Query: 727 FKI 729
           F++
Sbjct: 674 FRV 676