Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  118 bits (296), Expect = 9e-31
 Identities = 98/405 (24%), Positives = 189/405 (46%), Gaps = 64/405 (15%)

Query: 302 GLLLSIL--IALY-TGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKM 358
           G+L+S+L  IAL+ + R +  PI +  +       G++  +   ++ DE+ +LS S ++M
Sbjct: 364 GVLISLLAVIALWISSRALALPIRKAAQLAGAIQKGDFSQRMAHQSADEVGQLSASLDRM 423

Query: 359 AENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSN 418
           A++++  +                   V  R+++GD       + E + L  A+   V N
Sbjct: 424 ADSLQEQVH------------------VAERISQGDLAVEVRLASEQDQLGLALRRMVDN 465

Query: 419 VADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEE 478
           +  L+ ++++  EL+N +  +V    +     AT+ A A T+++   +  + +++++SE 
Sbjct: 466 LNGLVSQVQQSSELINDKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEY 525

Query: 479 LENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKML 538
                         A E    S   + ++ +G E + +  + MQ I              
Sbjct: 526 --------------ASEANALSRNSEHSARSGNELMVSLKAAMQEIN------------- 558

Query: 539 GEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSV 598
            + G  I  +   I++IA QT LLALNA+IEAARAG+ G+GFAVVA E++ LA    ++ 
Sbjct: 559 -QSGLDITNIIRAIEEIATQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAARSAEAA 617

Query: 599 EDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNE----SAVKI 654
           +     I+  N R        +KG +  D    A++ +     ++ + V+E    S+ + 
Sbjct: 618 QRSTRLIQESNART-------IKGMEITDDTARALEAIVQGAAQVSQLVDEIASASSQQA 670

Query: 655 NGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEEL 699
           +GI+  +Q   +  E    N+      SE+ T  A+E+T   +++
Sbjct: 671 SGIEQVSQAIGQIDEVVHHNSTN----SEQSTQAAQELTQQAQQM 711