Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (307), Expect = 4e-32
 Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 24/342 (7%)

Query: 388 NRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGA 447
           N +AKGD +   D S   N+        +  +A+  +++++ +  L  +I     +L  A
Sbjct: 225 NAIAKGDLSQTMDRSSIGND-------ELGTLANASEQMQQNLRQLIDEIISAVTQLSSA 277

Query: 448 EETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENS 507
            E  TQ++    Q A+   +Q  ++ + +  +        +V    E++   +      S
Sbjct: 278 VEEMTQISN---QSADGMKEQQYQITQVATAMAQMKAAVADVARNTEDSASQAMAANHKS 334

Query: 508 ETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNAS 567
           + G  +  + +  +Q + ++I E G+++  L +   +IN V  +I+ IA+QT LLALNA+
Sbjct: 335 QEGARENASMVRSIQQVADIIGEAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAA 394

Query: 568 IEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVD 627
           IEAARAG++G+GFAVVA E+++LA   + S  +I   IE +        D   + +  +D
Sbjct: 395 IEAARAGESGRGFAVVADEVRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSID 454

Query: 628 KGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTA 687
           K V   +     ++ I+ES+       N    G Q AS           E  ++++E + 
Sbjct: 455 KCVEQGNHSQSLMISIEESI------ANIADVGTQIASA--------CSEQDSVADELSR 500

Query: 688 TAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKSSQFKI 729
             E +  +++E+    ++      E+TQ+A  +     +FKI
Sbjct: 501 NVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542