Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  125 bits (314), Expect = 7e-33
 Identities = 81/294 (27%), Positives = 148/294 (50%), Gaps = 11/294 (3%)

Query: 427 REEVELLNIQIQKVEDELKGA----EETATQVAEAATQVAEAASDQSAKLQESSEELENT 482
           ++E+ LL   +Q +   L+G         TQ+A AA Q++  +   SA +     E++  
Sbjct: 382 QDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQV 441

Query: 483 YEGAKEVYSAAEETVKSSEEIKENSETGVEK-------VENAISRMQSITNVIDELGKSI 535
                E+ S  +E  +++E+  + ++   E+       V++A   +  +   + +LG+++
Sbjct: 442 ATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAM 501

Query: 536 KMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIK 595
           + L ED  KI  V  +IK +AEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA+  +
Sbjct: 502 QRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQ 561

Query: 596 KSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKIN 655
            S  +I   I+ + K       L        +  V+   +   AL++I +S+        
Sbjct: 562 NSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQ 621

Query: 656 GIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGI 709
            I   A+  S  TE   ++   +  ++++  +  E+  AST EL  +  +++ +
Sbjct: 622 QISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSM 675



 Score = 35.0 bits (79), Expect = 1e-05
 Identities = 17/95 (17%), Positives = 47/95 (49%)

Query: 623 KDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALS 682
           K+EVD+   A++E+   + ++  +  +++         A + S   + A +   ++A   
Sbjct: 435 KNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEV 494

Query: 683 EEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVA 717
           ++     + +T  + ++ S+I+ I+ +AE+   +A
Sbjct: 495 QQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLA 529