Pairwise Alignments
Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B
Score = 133 bits (334), Expect = 3e-35
Identities = 146/668 (21%), Positives = 281/668 (42%), Gaps = 136/668 (20%)
Query: 62 IVEFETTTSYTASLDTFSELLVNDDKEVLYDFAEKMKKSSE---------VDLVAFTDKN 112
++E + A D+ S+ +E L EK++ S++ +DL + ++
Sbjct: 122 VLESNSKAMLKARFDSLSQ------QEELLKLREKLENSADDASSNLFDLIDLESSQNQT 175
Query: 113 GNIISSS----DNVQTNLKPVISKLLSNEVQSSFEIISGSEASKYSDYKVNNINDALAIC 168
I+++ D T + + L++ E +S +E+IS K DY + + +
Sbjct: 176 EREIAAAAGAIDTTMTGIITTVYDLVAAEERSKYELIS-----KELDYMLGEVKTKMEY- 229
Query: 169 VVAPVYHSGELVGTVTLVDIVNNDDYWVDSLKERTGNEATIFLKNVRISTTVQTNGQDAT 228
+ GE + LV +N+D V LK G + + LK+ +I +T T
Sbjct: 230 ----ISRHGEGIIDADLVSTLNDDSTKV--LKMLEGKDTLVTLKSRQIDSTQLT------ 277
Query: 229 GTKCSDEVYNIITNHQDYVGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVI 288
S+++ + N L + T + I ++ N I
Sbjct: 278 ----SEKLTLVEKNALTVTEQMKRLAKDIETVTNDISNQALND----------------I 317
Query: 289 TDTRNEIIIISLLGLLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDEL 348
+I+ ++ ++++++I+ R + + ++E+ +G+ +K DE
Sbjct: 318 NSASLRTLILVVIAIVVAVVISFAVVRPLKRSLDEVNGALNVLASGDLTHKLDDTGHDEF 377
Query: 349 QELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNL 408
ELS + N++ ++ L +L+ ++ D N++A A A+E+
Sbjct: 378 AELSRNCNRLVDS--------------LRSLIASILDRSNQLA-----AAAEET------ 412
Query: 409 EKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQ 468
AI + + I IQ+ + ++ T+++ +A QV +A D
Sbjct: 413 -SAITSQTT-----------------IGIQEQKSQVDQVATATTELSSSAHQVNMSADDA 454
Query: 469 SAKLQESSEELEN----TYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSI 524
++++++ EE ++ E + + S A+E K+S
Sbjct: 455 LSQIKQADEETQHMRTIADENKRTILSLADEVAKAS------------------------ 490
Query: 525 TNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVA 584
K I + D I + +I+ IAEQT LLALNA+IEAARAG+ G+GFAVVA
Sbjct: 491 --------KVINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 542
Query: 585 SEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIK 644
E++SLA + S +I IE + + + + G+++ V ++ N AL I
Sbjct: 543 DEVRSLASRTQDSTREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTIS 602
Query: 645 ESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIE 704
SV+++ I AQ + ++ + + IAA+SEE AE+ S+ E+ + E
Sbjct: 603 HSVHKAYDAGTHIAQAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARLAE 662
Query: 705 EIRGIAEE 712
E++ +E
Sbjct: 663 ELQSSVKE 670
Score = 50.4 bits (119), Expect = 3e-10
Identities = 77/400 (19%), Positives = 163/400 (40%), Gaps = 37/400 (9%)
Query: 348 LQELSDSFNKMAENVKNL--MKTMDMDKVELA----TLLTN----VSDVMNRVAKGDFTA 397
L + S KM E L +K+ +D +L TL+ V++ M R+AK T
Sbjct: 246 LNDDSTKVLKMLEGKDTLVTLKSRQIDSTQLTSEKLTLVEKNALTVTEQMKRLAKDIETV 305
Query: 398 RADESRE--NNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVA 455
D S + N+ ++ T + V ++ + ++ +++ DE+ GA
Sbjct: 306 TNDISNQALNDINSASLRTLILVVIAIVVAVVISFAVVR-PLKRSLDEVNGALNVLAS-G 363
Query: 456 EAATQVAEAASDQSAKLQESSEELENTYEG--------AKEVYSAAEETVKSSEEIKENS 507
+ ++ + D+ A+L + L ++ + ++ +AAEET I +
Sbjct: 364 DLTHKLDDTGHDEFAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEET----SAITSQT 419
Query: 508 ETGVEKVENAISRMQSITNVIDELGKSIKMLGEDG----KKINEVTGLIKDIAEQTGLLA 563
G+++ ++ + ++ + T + + M +D K+ +E T ++ IA++
Sbjct: 420 TIGIQEQKSQVDQVATATTELSSSAHQVNMSADDALSQIKQADEETQHMRTIADENKRTI 479
Query: 564 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGK 623
L+ + E A+A ++ I S+ + I+ E N ++ I+ G+
Sbjct: 480 LSLADEVAKASKVINKVHSDSASIGSILDVIRGIAEQTNLLA------LNAAIEAARAGE 533
Query: 624 DEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSE 683
V+A DEV + ++S E I ++ G Q A + AQ +E
Sbjct: 534 QGRGFAVVA-DEVRSLASRTQDSTREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTE 592
Query: 684 EFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKK 723
+ + ++ S + I A+E V+++V++K
Sbjct: 593 QANQALQTISHSVHKAYDAGTHIAQAAQEQNLVSQQVSEK 632
Score = 44.7 bits (104), Expect = 2e-08
Identities = 81/418 (19%), Positives = 166/418 (39%), Gaps = 55/418 (13%)
Query: 347 ELQELSDSFNKMAENVKNLMK------TMDMDKVELATLLTNVSDVMNRVAKGDFTARAD 400
+L LS S+ + N K ++K + + ++L L N +D A + D
Sbjct: 112 QLSGLSSSYQVLESNSKAMLKARFDSLSQQEELLKLREKLENSADD----ASSNLFDLID 167
Query: 401 ESRENNNLEKAINTA-----------VSNVADLIK-ELREEVELLNIQIQKVEDELKGAE 448
N E+ I A ++ V DL+ E R + EL++ ++ + E+K
Sbjct: 168 LESSQNQTEREIAAAAGAIDTTMTGIITTVYDLVAAEERSKYELISKELDYMLGEVKTKM 227
Query: 449 ETATQVAEAA--TQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKEN 506
E ++ E + +D S K+ + E + + + T + +++N
Sbjct: 228 EYISRHGEGIIDADLVSTLNDDSTKVLKMLEGKDTLVTLKSRQIDSTQLTSEKLTLVEKN 287
Query: 507 SETGVEKVENAISRMQSITNVIDELGKS--------------IKMLGEDGKKINEVTGLI 552
+ T E+++ ++++TN I + I ++ V L
Sbjct: 288 ALTVTEQMKRLAKDIETVTNDISNQALNDINSASLRTLILVVIAIVVAVVISFAVVRPLK 347
Query: 553 KDIAEQTGLLALNASIEAA-RAGDAGKG-FAVVASEIKSLAEEIKKSVEDINHTIEGVNK 610
+ + E G L + AS + + D G FA ++ L + ++ + I +
Sbjct: 348 RSLDEVNGALNVLASGDLTHKLDDTGHDEFAELSRNCNRLVDSLRSLIASILDRSNQLAA 407
Query: 611 RIDDT------IDLGLKG-KDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQN 663
++T +G++ K +VD+ A E++ + ++ S +++ +I Q+
Sbjct: 408 AAEETSAITSQTTIGIQEQKSQVDQVATATTELSSSAHQVNMSADDALSQIKQADEETQH 467
Query: 664 ----ASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVA 717
A EN L A E+A S+ +V + + + SI++ IRGIAE+ +A
Sbjct: 468 MRTIADENKRTILSLADEVAKASK----VINKVHSDSASIGSILDVIRGIAEQTNLLA 521