Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 6e-33
 Identities = 87/299 (29%), Positives = 150/299 (50%), Gaps = 19/299 (6%)

Query: 431 ELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEEL----ENTYEGA 486
           + +N  ++ ++ + +G  E+A+++ +    V  + +  +A+LQ S+  L     +T + +
Sbjct: 125 DTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGDMARSTDDQS 184

Query: 487 KEVYSAAEET---VKSSEEIKENSETGVEKVENAISRMQSIT-NVIDELGKS---IKMLG 539
             V  AA +    V       E     +  V + + R   +  N +   GK+   I  L 
Sbjct: 185 VRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTINTLA 244

Query: 540 EDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVE 599
           +   +I EV GLI DIA QT LLALNA+IEAARAG+AGKGFAVVA E+K+LA++  ++ +
Sbjct: 245 QASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATD 304

Query: 600 DINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKH 659
           +I   IEG+     + + L ++G  E       I E+++A   I  +++E    +  I  
Sbjct: 305 EIVGQIEGMRTATHEAV-LAIQGIGE------TIREISEAAQAIHHAISEQRAVVGEIAG 357

Query: 660 GAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRG-IAEEVTQVA 717
               A +      +    +A    E T   EE+T +  +L+   E + G +A  +TQV+
Sbjct: 358 NVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVARFITQVS 416