Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 799 a.a., methyl-accepting chemotaxis protein I from Phaeobacter inhibens DSM 17395

 Score =  148 bits (374), Expect = 9e-40
 Identities = 138/560 (24%), Positives = 243/560 (43%), Gaps = 73/560 (13%)

Query: 162 NDALAICVVAPVYHS-GELVGTVTLVDIVNNDDYWVDSLKERTGNEATIFLKNVRISTTV 220
           N A A  V +PV+ + G+L G + L   V   D     +   T    T+ +  V     V
Sbjct: 211 NGAAAAFVASPVFDAAGDLQGVIALQVPV---DMLTKIVNPVTDMNETLDVFIVGQDLKV 267

Query: 221 QTNGQDATGTKCSDEVYNIITNHQD--------------YVGTANVLGSEYITKYSPIED 266
           +TN +        D+V+ ++    +              Y  T    G+  +    P++ 
Sbjct: 268 RTNSRH-------DDVHQVLEQLPETEQISAALAGESGFYADTVASHGTPVVAYSEPVDM 320

Query: 267 KDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLLLSILIALYTGRKITKPIEELKK 326
              N    I     +A   A +   RN +++ISL+   +  L+     R IT+PI  +  
Sbjct: 321 PQVNWA--IVAEQDRAELFAPVVRERNILLLISLVCAAVMSLVGWLFARSITQPINRICN 378

Query: 327 GTEEFGNGNYDYKTT-VKTGDELQELSDSFNKMAENVKNLMKTMDMDKVELA----TLLT 381
             EE  +GN D         DE+ ++      + +++K   ++ ++D+ EL      ++ 
Sbjct: 379 RIEEVASGNLDSDIPEAGRNDEIGDIGKQLISLQDDLKQA-RSAELDRSELQQQQEVVVE 437

Query: 382 NVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVE 441
            +S  + R+A GDF+    +   +++ EK           L +      E L+  + +V 
Sbjct: 438 QLSSGLVRLASGDFSQPISDPFPSHH-EK-----------LRENFNRTSETLSSTVTQVI 485

Query: 442 DELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSE 501
           D  +     A ++++A+  ++     Q+A L+E++  L+      K     A       +
Sbjct: 486 DTAESIRSGANEISQASDDLSNRTESQAATLEETAAALDEMTASVKSAAEGARSVESIMQ 545

Query: 502 EIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGL 561
           E K+ +ET  E V++A+S M  I               +    I+++  +I DIA QT L
Sbjct: 546 EAKQEAETSGEVVQSAVSAMTEIE--------------QSSTHISQIISVIDDIAFQTNL 591

Query: 562 LALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLK 621
           LALNA +EAARAG+AGKGFAVVASE+++LA+    +  +I   I    K           
Sbjct: 592 LALNAGVEAARAGEAGKGFAVVASEVRALAQRSSDAAMEIKTLIGDSTK----------- 640

Query: 622 GKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAAL 681
              +V++GV  + +  DAL  I E V+  +  ++GI  GA   S           ++  +
Sbjct: 641 ---QVERGVDLVGKTGDALQGIVERVSHISQLVSGIATGASEQSTGLHEINTGVTQLDQV 697

Query: 682 SEEFTATAEEVTASTEELNS 701
           +++  A  EE TA+   LN+
Sbjct: 698 TQQNAAMVEEATAAGHMLNA 717



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 33/181 (18%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 347 ELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVM---NRVA--KGDFTARADE 401
           E ++ +++  ++ ++  + M  ++     ++ +++ + D+    N +A   G   ARA E
Sbjct: 546 EAKQEAETSGEVVQSAVSAMTEIEQSSTHISQIISVIDDIAFQTNLLALNAGVEAARAGE 605

Query: 402 S--------RENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQ 453
           +         E   L +  + A   +  LI +  ++VE     + K  D L+G  E  + 
Sbjct: 606 AGKGFAVVASEVRALAQRSSDAAMEIKTLIGDSTKQVERGVDLVGKTGDALQGIVERVSH 665

Query: 454 VAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEK 513
           +++  + +A  AS+QS  L E +  +    +  ++  +  EE   +   +  ++    E 
Sbjct: 666 ISQLVSGIATGASEQSTGLHEINTGVTQLDQVTQQNAAMVEEATAAGHMLNADASKLAEL 725

Query: 514 V 514
           V
Sbjct: 726 V 726