Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (332), Expect = 5e-35
 Identities = 120/467 (25%), Positives = 214/467 (45%), Gaps = 83/467 (17%)

Query: 250 ANVLGSEYITKYSPIEDKDGNVVGII-----FTGIPKAPFVAVITDTRNEIIIISLLGLL 304
           A  L  E I  Y  I+   G +  +I       G  K     +   + +  I+I+L+  +
Sbjct: 141 AGQLREEIIPLYRVIDPISGTIAELISLQLKVAGEEKDRVAEIYESSISLFILITLVAAI 200

Query: 305 LSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKN 364
            SI++ ++  R + KPI  ++              T + T  +  +L+ +F ++      
Sbjct: 201 ASIVLGVWINRSVMKPINHIR--------------TQLHTIQQDSDLTVTFEQL------ 240

Query: 365 LMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIK 424
                  +K EL  + T ++DV                R    + K +  A ++V+D   
Sbjct: 241 -------NKDELGLISTGLNDVF---------------RHLRGILKGVAEAANSVSDSAL 278

Query: 425 ELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYE 484
            L E  ++ N +IQ+ + E    E+TAT + E    V E A   +A              
Sbjct: 279 ALNEFTQISNARIQQQQAE---TEQTATAMNEMTATVNEVAQSTTA-------------- 321

Query: 485 GAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKK 544
                   A ++ ++++    N   G + V+ +IS MQ+++  I    + I  L  + + 
Sbjct: 322 --------AADSARNADRFAAN---GNDIVQLSISSMQALSMQIQSTSEVITHLSHESQH 370

Query: 545 INEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHT 604
           I  V  +IK IAEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA+  +++ ++I   
Sbjct: 371 IGSVLSVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEATQEIETM 430

Query: 605 IE----GVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHG 660
           IE    GVN+ +   +D+G+K  D+ ++     ++  +AL +I  SV+        I   
Sbjct: 431 IETLQSGVNEAV-TAMDVGIKQVDDANQ---QTNKAGEALQEIVASVDNITEMNTHIATA 486

Query: 661 AQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIR 707
           A+  S   E   ++   I+ ++ + T +A E+  S  +L S+ + +R
Sbjct: 487 AEEQSSVAESINRSIIAISDIASQSTESALELGHSIAQLTSLADSMR 533