Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (318), Expect = 2e-33
 Identities = 87/346 (25%), Positives = 164/346 (47%), Gaps = 30/346 (8%)

Query: 376 LATLLTNVSDVMNRVAKGDFTARADES---------RENNNLEKAINTAVSNVADLIKEL 426
           L   L  V++ +N +A G+ T + D+S         R  N L  ++ T +  + D   +L
Sbjct: 347 LKNSLDKVNNALNILASGNLTHKLDDSGHDEFAELSRNCNRLVDSLRTLIQGILDRSNQL 406

Query: 427 REEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGA 486
               E  +    +    ++  +    QVA A TQ++ +A   S    E+  ++    E A
Sbjct: 407 AAAAEETSAITAQTTAGIQEQKNQVDQVATATTQLSSSAMQVSTSADEALNQIRQADEEA 466

Query: 487 KEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKIN 546
           + + + A+E  ++                     + ++ + + + G+ I  +  D   I 
Sbjct: 467 QHMRAIADENKRT---------------------ILALADEVAKAGQVINKVHSDSASIG 505

Query: 547 EVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIE 606
            +  +I+ IAEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA   + S ++I   I+
Sbjct: 506 SILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTQEIQQMIQ 565

Query: 607 GVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASE 666
            + +   + + +   G+ + +  V   ++ N AL  I  +V+ +      I + AQ  + 
Sbjct: 566 VLQQGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYAHDSGTHIANAAQEQNL 625

Query: 667 NTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEE 712
            ++   +  + IAA+SEE    A++   S+ ++  + EE++    E
Sbjct: 626 VSQQVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQASVGE 671