Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 677 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  137 bits (346), Expect = 1e-36
 Identities = 115/481 (23%), Positives = 203/481 (42%), Gaps = 70/481 (14%)

Query: 237 YNIITNHQDYVGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEII 296
           Y  +   Q+ V  A    SE +   S   D        +  G+  A  V           
Sbjct: 247 YEALDRQQEVVAAAQAAASEALQHASAASDASVRTATWLLAGVALAAMV----------- 295

Query: 297 IISLLGLLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFN 356
               +G +++ ++   T R++ K   EL         G+YD        D+    +  + 
Sbjct: 296 ----IGAVIAFVLPRGTVRQLGKDPGELAAIARRVTEGDYDI-------DDGSPRAGVYG 344

Query: 357 KMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAV 416
            + + V++L K +                           A A+E  +    E       
Sbjct: 345 HIVDMVQSLKKHL---------------------------ASAEEESQRAREESERARLA 377

Query: 417 SNVADLIKELREEVELLNIQIQKVEDELKGAEE----TATQVAEAATQVAEAASDQSAKL 472
              AD   E R  VE  N  +  V DE           A ++A  A QV   A  Q  ++
Sbjct: 378 MQQAD---EARTGVEAANRTMLSVADEAHAIAARIAAAAEELAAQAEQVGAGAEVQQQRM 434

Query: 473 QESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELG 532
            E+   +        EV ++A  T +SS++ + N+E G + V   ++ ++ + +  D + 
Sbjct: 435 AETLAAITQMNGAVAEVAASAAVTSRSSDDSRRNAEEGAQVVARTVAAIEKVASGSDAVS 494

Query: 533 KSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAE 592
           ++++ LG   + I +V  +I DIA+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE
Sbjct: 495 RNMQELGVKAEAIGKVMEMIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAE 554

Query: 593 EIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEV-------NDALLKIKE 645
              ++  ++  ++ G+        D+  +  + V+  V A+ E         +AL  I  
Sbjct: 555 RTMQATAEVGGSVRGIQ-------DVARRNVEAVEHSVAAVGEATRSARESGEALTAIVR 607

Query: 646 SVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEE 705
            V +SA ++NGI   A+  S  +E   +  Q ++ ++ E     ++   +  EL+ +  +
Sbjct: 608 IVGDSAAQVNGIATAAEQQSAASEQIGRTVQSVSDIAAETAGGMQQSAVAIRELSEMAAQ 667

Query: 706 I 706
           +
Sbjct: 668 L 668



 Score = 28.9 bits (63), Expect = 9e-04
 Identities = 84/420 (20%), Positives = 153/420 (36%), Gaps = 38/420 (9%)

Query: 337 DYKTTVKTGDELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFT 396
           D +  +KT  E      S + M E+ K L++ ++  K   A L+ + ++ +    + D  
Sbjct: 77  DARAIIKTAGE----GLSIDWMQEDGKGLLENLENFKTAFAQLVNSQNEAIAMRQRIDAN 132

Query: 397 A-RADESRENNNLEKAINTAVSNVADLIKELRE---------EVELLNIQ-IQKVEDELK 445
           A R  E+    +   A     S+ A  +K  +          EV +L  Q +    +EL+
Sbjct: 133 AARVVETAAALDGRLAGALQASHDAGRLKGYQTLHAGTAAFAEVRVLTGQFLDTPTEELR 192

Query: 446 GAEETATQVAEAATQVAEAASDQSAKLQESSEELEN---TYEGAKEVYS----AAEETVK 498
            A       A  A Q A  A    A  Q++ +EL      Y G   ++S    A  E + 
Sbjct: 193 TAIRARLTEARKAFQAARDAQPDEAS-QDAVQELMGYVGNYSGLFGIFSRQMLAKYEALD 251

Query: 499 SSEEIKENSETGV-EKVENAISRMQSITNVIDELGKSIKMLGED-GKKINEVT--GLIKD 554
             +E+   ++    E +++A +   +       L   + +     G  I  V   G ++ 
Sbjct: 252 RQQEVVAAAQAAASEALQHASAASDASVRTATWLLAGVALAAMVIGAVIAFVLPRGTVRQ 311

Query: 555 IAEQTGLLALNAS--IEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRI 612
           + +  G LA  A    E     D G   A V   I  + + +KK +       +   +  
Sbjct: 312 LGKDPGELAAIARRVTEGDYDIDDGSPRAGVYGHIVDMVQSLKKHLASAEEESQRAREE- 370

Query: 613 DDTIDLGLKGKDEVDKGVIAI--------DEVNDALLKIKESVNESAVKINGIKHGAQNA 664
            +   L ++  DE   GV A         DE +    +I  +  E A +   +  GA+  
Sbjct: 371 SERARLAMQQADEARTGVEAANRTMLSVADEAHAIAARIAAAAEELAAQAEQVGAGAEVQ 430

Query: 665 SENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKS 724
            +     L    ++     E  A+A   + S+++     EE   +        E+V   S
Sbjct: 431 QQRMAETLAAITQMNGAVAEVAASAAVTSRSSDDSRRNAEEGAQVVARTVAAIEKVASGS 490