Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 769 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  123 bits (309), Expect = 3e-32
 Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 24/315 (7%)

Query: 414 TAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQ 473
           T +   A +I E  E +   + +   V  +L  A E   Q++    Q A  +  Q  +  
Sbjct: 471 TEMKRQAAIIAEQNERIARASAEADDVASQLATASE---QLSAQIEQSARGSDIQRERTA 527

Query: 474 ESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGK 533
           E++  +E       EV   A    + +E+ K  ++ G E V+ ++  +Q    +   L  
Sbjct: 528 EAATAMEQMNASVLEVARNAGGAAEMAEKAKIRAQEGAEVVDGSVRTIQHAHELASHLKS 587

Query: 534 SIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEE 593
            +  LG   + I ++  +I DIA+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+
Sbjct: 588 DMAELGTQAQGIGQIMNVIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK 647

Query: 594 IKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVK 653
              +  ++   I G+ +     I    K    +++G        D L +I   V  +A +
Sbjct: 648 TMTATNEVGSAIRGIQESARKNIANTEKATAAIEEGTGMARRSGDVLREIVGLVESTADQ 707

Query: 654 INGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEV 713
           +                     + IA  SE+ +A +EE+  ST+E+  I  E        
Sbjct: 708 V---------------------RSIATASEQQSAASEEINRSTDEITRIAAETAEAMRHS 746

Query: 714 TQVAERVTKKSSQFK 728
            Q  E V++ +S  K
Sbjct: 747 AQAVEDVSRLASDLK 761



 Score = 39.7 bits (91), Expect = 6e-07
 Identities = 76/394 (19%), Positives = 144/394 (36%), Gaps = 61/394 (15%)

Query: 380 LTNVSDVMNRVAKGDFTARADESR--ENNNLEKAINTAVSNVADLIKELREEVELLNIQI 437
           +  +     +VA+GD  A  D +   E + L  +I   V+ + + +   +  +E + + +
Sbjct: 312 MNRIRQFAGQVAQGDLRAVMDGAYHFELDELATSIRIMVAELKEKLGFSQSVLEAMVVPV 371

Query: 438 QKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAA---E 494
             V+      EE      +A   + E  +D  A+   +  E+     G K     A   +
Sbjct: 372 LIVD-----REERTVFTNKACMDMLEIDTDPKAQYGRTLAEVFYNEPGRKTAVGRAMNEK 426

Query: 495 ETVKSSEEIKENSETGVEKVENAISRMQSIT-NVID---------ELGKSIKMLGEDGKK 544
            ++K+ E +    + G   V   ++ +Q +  NVI          E+ +   ++ E  ++
Sbjct: 427 TSIKNLEVVIAGHKGGKVDVLANVTYLQDLDGNVIGGFCLYIDTTEMKRQAAIIAEQNER 486

Query: 545 INEVTGLIKDIAEQ--TGLLALNASIE-AARAGDAGKGFAVVASEIKSLAEEIKKSVEDI 601
           I   +    D+A Q  T    L+A IE +AR  D  +      +E  +  E++  SV ++
Sbjct: 487 IARASAEADDVASQLATASEQLSAQIEQSARGSDIQRERT---AEAATAMEQMNASVLEV 543

Query: 602 NHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKH-- 659
                G  +  +       +G + VD  V  I   ++    +K  + E   +  GI    
Sbjct: 544 ARNAGGAAEMAEKAKIRAQEGAEVVDGSVRTIQHAHELASHLKSDMAELGTQAQGIGQIM 603

Query: 660 -------------------GAQNASENTEGALKNAQEIAALSEEFTATAEEV-------- 692
                               A  A +   G    A E+  L+E+      EV        
Sbjct: 604 NVIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATNEVGSAIRGIQ 663

Query: 693 ------TASTEELNSIIEEIRGIAEEVTQVAERV 720
                  A+TE+  + IEE  G+A     V   +
Sbjct: 664 ESARKNIANTEKATAAIEEGTGMARRSGDVLREI 697



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 17/201 (8%)

Query: 350 ELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLE 409
           E+ D   +  ++   L   +  D  EL T    +  +MN +A  D   + +    N  +E
Sbjct: 566 EVVDGSVRTIQHAHELASHLKSDMAELGTQAQGIGQIMNVIA--DIADQTNLLALNAAIE 623

Query: 410 KA-INTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETA----------TQVAEAA 458
            A    A    A +  E+R+  E       +V   ++G +E+A          T   E  
Sbjct: 624 AARAGDAGRGFAVVADEVRKLAEKTMTATNEVGSAIRGIQESARKNIANTEKATAAIEEG 683

Query: 459 TQVAEAASD---QSAKLQESSEELENTYEGAKEVYSAAEETV-KSSEEIKENSETGVEKV 514
           T +A  + D   +   L ES+ +   +   A E  SAA E + +S++EI   +    E +
Sbjct: 684 TGMARRSGDVLREIVGLVESTADQVRSIATASEQQSAASEEINRSTDEITRIAAETAEAM 743

Query: 515 ENAISRMQSITNVIDELGKSI 535
            ++   ++ ++ +  +L + I
Sbjct: 744 RHSAQAVEDVSRLASDLKRII 764