Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

 Score =  317 bits (812), Expect = 1e-90
 Identities = 173/499 (34%), Positives = 284/499 (56%), Gaps = 33/499 (6%)

Query: 8   IGTKLLIFMILCAIIPLMVVGGVSTNKITEEMQIQGDNSVNDNLNIFQESIENVIVEFET 67
           IGTKLLIF I+  +IP++++  VST+ I++ M    ++ ++ NL I  E +++V+VEF+T
Sbjct: 9   IGTKLLIFSIIIVLIPIVMMSYVSTDTISDLMTSNQESELDINLGILNERMDSVLVEFDT 68

Query: 68  TTSYTASLDTFSELLVNDDKEVLYDFAEKMKKSSEVDLVAFTDKNGNIISSS-DNVQTNL 126
            T+YTA+L      + N+DK+ L DFA  ++  S +DL  FTD +GN+I +S  +    +
Sbjct: 69  MTAYTANLPVVVNAVKNNDKDTLQDFANGLEDQSWIDLAVFTDADGNVICASYGDDDAEI 128

Query: 127 KPVISKLLSNEVQSSFEIISGSEASKYSDYKVNNINDALAICVVAPVYHSGELVGTVTLV 186
              + KLL      +++I+   EASKYSDY+++  +DAL I  VAP+Y    L+G VT V
Sbjct: 129 SSYVKKLLEKNTIYAYDILPNEEASKYSDYELDG-HDALTIFTVAPIYDGDSLIGAVTYV 187

Query: 187 DIVNNDDYWVDSLKERTGNEATIFLKNVRISTTVQTNGQDATGTKCSDEVYNIITNHQDY 246
           DI+N DDYWVD +KE TG+EA+I+L NVRISTT Q +G D  G    +++Y  ++  QD 
Sbjct: 188 DIMNKDDYWVDRIKEVTGDEASIYLNNVRISTTCQKDGVDFVGELADEDIYETVSKKQDV 247

Query: 247 VGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLLLS 306
             T  + G  Y+ KYSPI + DG V+G+   G PK+PF  ++     +I  I+   L+++
Sbjct: 248 RSTVTINGVPYLAKYSPIYNIDGEVIGMTCVGTPKSPFTVLLNSVIQKIFFIAFSSLIIA 307

Query: 307 ILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKNLM 366
           + +A+   +KI   I++LK   E FG GNYD + ++ TGDEL+EL++SFNKMA+ ++   
Sbjct: 308 VFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDELEELAESFNKMADEIRKSD 367

Query: 367 KTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKEL 426
           K +  D   L T                     DE +E +NL+  I + VS+      EL
Sbjct: 368 KKLKSDAHTLKTSF-------------------DELKEVDNLKSEILSIVSH------EL 402

Query: 427 REEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGA 486
           R  +  +   ++ ++D      ETA +++E   +     S+ S +L+  ++ + +     
Sbjct: 403 RTPLTAILGYVELLKD------ETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVD 456

Query: 487 KEVYSAAEETVKSSEEIKE 505
            ++     + +   +E+ +
Sbjct: 457 NKILDIKRDKINLKKEVND 475