Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis JJ

 Score =  412 bits (1058), Expect = e-119
 Identities = 237/460 (51%), Positives = 325/460 (70%), Gaps = 8/460 (1%)

Query: 271 VVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLLLSILIALYTGRKITKPIEELKKGTEE 330
           +  I+ + I    F A+I  +   + I+ ++  ++SI+I+   G  I K    L   T  
Sbjct: 12  ITAILSSAIIFVSFYALIAASSFNLNILFVV-FIVSIVISTAIGYVILKKTY-LDNVTNF 69

Query: 331 FGNGNYDYKTTVKTGDE--LQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMN 388
             + +       K  DE  ++ +  +F K+ ++ +N +KT    K ++A   + +  +  
Sbjct: 70  LNSSSKIIGKEYKHCDEEMVETVISNFEKLKKD-ENFLKTY---KKDVANTFSELHTIFK 125

Query: 389 RVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAE 448
            + +GDFT RAD +R+ N L+   N A+ NV+ ++ +L++++E LN ++ K +++L  AE
Sbjct: 126 SLEQGDFTIRADTNRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAE 185

Query: 449 ETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENSE 508
           ET+ QVA+AA+QVA AA+DQSAKLQ+ S++LE T E    V  AA++TV ++ EI+ENSE
Sbjct: 186 ETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAFEIEENSE 245

Query: 509 TGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASI 568
            GV+KVENAI  MQSITNVI+ LGK+I+ LG + KKINEVT LIKD+AEQTGLLALNASI
Sbjct: 246 MGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASI 305

Query: 569 EAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDK 628
           EAARAGDAGKGFAVVASEIKSLAEEIKKSVEDIN TI GVN++++ TIDLG+ GKDEVDK
Sbjct: 306 EAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDK 365

Query: 629 GVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTAT 688
           GVIAIDEVN A LKIKESV  ++ KIN IK  A+ A+ N E ALKNAQ+IA++SEEF AT
Sbjct: 366 GVIAIDEVNGAFLKIKESVETTSEKINSIKINAEKAANNVENALKNAQDIASISEEFAAT 425

Query: 689 AEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKSSQFK 728
           AEE+TAS EE + I+ EI    EE+T+ +E+++K  S+FK
Sbjct: 426 AEELTASAEEQSRIMNEIDDSIEEITKSSEQISKDVSKFK 465