Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 676 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  142 bits (359), Expect = 4e-38
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 12/338 (3%)

Query: 374 VELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELL 433
           + + T +   S+    VA GD T     S  N +    + T  +N+ D I EL       
Sbjct: 347 MSVRTAINRFSEAARNVAAGDMTTHI--SLRNRDELGELTTEFNNMTDRIAEL------- 397

Query: 434 NIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAA 493
              I+ V       ++ AT+V + A   +EA + Q  +  + +E +    E   EV  +A
Sbjct: 398 ---IRSVSRTTADVDQQATRVNDTAAANSEAVARQMEESGQINEAMNQMVEAVHEVTESA 454

Query: 494 EETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIK 553
                S+   ++++ETG   V + +  +  +   I    + I  + +D   I++V   IK
Sbjct: 455 HRVADSASNAEQDTETGRGVVADTVETINKLAGEISGAVEVINRVSKDSDNISQVLVEIK 514

Query: 554 DIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRID 613
            IAEQT LLALNA+IEAARAG+ G+GFAVVA E++SL++   KS E+I   I  +   + 
Sbjct: 515 AIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLSQRTHKSTEEIEGMISRLQSGVK 574

Query: 614 DTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALK 673
           D +      +D  +  V    EV +AL +I + ++      + I   A+  S   +    
Sbjct: 575 DAVSAMTNSRDVTEATVQKSGEVTEALDRIAKGISVIVDMSHQIAQAAEEQSAVAKNVNS 634

Query: 674 NAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAE 711
           N ++I  L  +  A AEE   S+ E++ +   ++ + E
Sbjct: 635 NVEQIGELGHKTAANAEETLGSSREMSQLTASLQRLVE 672



 Score = 70.9 bits (172), Expect = 2e-16
 Identities = 73/355 (20%), Positives = 148/355 (41%), Gaps = 45/355 (12%)

Query: 292 RNEIIIISLLGLLLSILIALYTG--RKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQ 349
           +  +I+++L+ +LL +++ LY G    +   I    +       G+     +++  DEL 
Sbjct: 323 QRRLIVVALIAVLL-VVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELG 381

Query: 350 ELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLE 409
           EL+  FN M + +  L++++     ++    T V+D     A  +  A A +  E+  + 
Sbjct: 382 ELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVND----TAAANSEAVARQMEESGQIN 437

Query: 410 KAINTAVS----------NVADLIKELREEVEL-------LNIQIQKVEDELKGAEETAT 452
           +A+N  V            VAD      ++ E            I K+  E+ GA E   
Sbjct: 438 EAMNQMVEAVHEVTESAHRVADSASNAEQDTETGRGVVADTVETINKLAGEISGAVEVIN 497

Query: 453 QVAEAATQVAEA-----ASDQSAKLQESSEELENTYEG---------AKEVYSAAEETVK 498
           +V++ +  +++      A  +   L   +  +E    G         A EV S ++ T K
Sbjct: 498 RVSKDSDNISQVLVEIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLSQRTHK 557

Query: 499 SSEEIK---ENSETGVEKVENAISRMQSITN-VIDELGKSIKMLGEDGKKINEVTGL--- 551
           S+EEI+      ++GV+   +A++  + +T   + + G+  + L    K I+ +  +   
Sbjct: 558 STEEIEGMISRLQSGVKDAVSAMTNSRDVTEATVQKSGEVTEALDRIAKGISVIVDMSHQ 617

Query: 552 IKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIE 606
           I   AE+   +A N +    + G+ G   A  A E    + E+ +    +   +E
Sbjct: 618 IAQAAEEQSAVAKNVNSNVEQIGELGHKTAANAEETLGSSREMSQLTASLQRLVE 672



 Score = 46.2 bits (108), Expect = 5e-09
 Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 18/173 (10%)

Query: 563 ALNASIEAAR---AGDAGKGFAV--------VASEIKSLAEEIKKSVEDINHTIEGVNKR 611
           A+N   EAAR   AGD     ++        + +E  ++ + I + +  ++ T   V+++
Sbjct: 352 AINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQ 411

Query: 612 IDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTE-- 669
                D      + V + +    ++N+A+ ++ E+V+E     + +   A NA ++TE  
Sbjct: 412 ATRVNDTAAANSEAVARQMEESGQINEAMNQMVEAVHEVTESAHRVADSASNAEQDTETG 471

Query: 670 -GALKNAQE-IAALSEEFTATAE---EVTASTEELNSIIEEIRGIAEEVTQVA 717
            G + +  E I  L+ E +   E    V+  ++ ++ ++ EI+ IAE+   +A
Sbjct: 472 RGVVADTVETINKLAGEISGAVEVINRVSKDSDNISQVLVEIKAIAEQTNLLA 524