Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (311), Expect = 1e-32
 Identities = 94/366 (25%), Positives = 166/366 (45%), Gaps = 56/366 (15%)

Query: 380 LTNVSDVMNRVAKG--DFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQI 437
           + N++D +N +AKG  D T R     E+                   E+ +     N+ +
Sbjct: 229 IKNMADNLNDIAKGEGDLTKRLSVKGED-------------------EIAQLGRAFNLFV 269

Query: 438 QKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETV 497
            K++  +        +V  AA  + +     S++L   + E +       E+ S A E  
Sbjct: 270 DKLQHIIGDVASATAKVKTAANAIHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASEVA 329

Query: 498 KSSEEIKENSETGVEKVENA-------ISRMQSITNVIDELGKSIKMLGEDGKKINEVTG 550
           +++ ++ E ++     V NA       +  + ++   I+    SIK L E  +KIN V  
Sbjct: 330 QNTTQVAEATQAATGDVANAQRCVDASLEEIAALMEQINHAAGSIKSLSEQSQKINSVLS 389

Query: 551 LIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNK 610
           +I  IAEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA   + S  +IN  +  ++K
Sbjct: 390 VIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSALHK 449

Query: 611 RIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEG 670
            +   +    K  DE  +  +   E + A+ +   SV  +   IN +             
Sbjct: 450 LVSQAV----KTMDESQQSCVRSVESSRAISESLGSVTSAVTAINDM------------- 492

Query: 671 ALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKSS----- 725
               + +IA  + E ++  EE+  +   +  I+ E+   +E   +V++ V+++ +     
Sbjct: 493 ----STQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEHAARVSQTVSQEGTNLGNL 548

Query: 726 --QFKI 729
             QFKI
Sbjct: 549 VGQFKI 554