Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 603 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  139 bits (350), Expect = 4e-37
 Identities = 113/434 (26%), Positives = 193/434 (44%), Gaps = 56/434 (12%)

Query: 291 TRNEIIIISLLGL-LLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQ 349
           TR  +II ++L L ++ + + + TG  I +P+ E     +    GN D +   +  DE+ 
Sbjct: 206 TRLFLIIAAVLVLGVIPLCVLIITG--IVRPLREATGAAQGVAAGNLDIRIVEQGRDEVA 263

Query: 350 ELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLE 409
           +L  + N M                 +ATL TN+ D+           +A E+  N   +
Sbjct: 264 QLQKALNSM-----------------VATLRTNMDDI-----------KAKEAEANRQAD 295

Query: 410 KAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQS 469
            A + A       +K      E +     ++E  +K      + +   A  +     +Q 
Sbjct: 296 VARDAARQADEARMKAAAATREGMLTAASRLEGVVKRINGATSDLERRAGDIDRGTDNQL 355

Query: 470 AKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVID 529
           A++ E++  +E       EV   A    + ++  +  +E G E V   +  M+ +  +  
Sbjct: 356 ARIGETATAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLAT 415

Query: 530 ELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKS 589
            L  ++  LG+  + I  V  +I DIA+QT LLALNA+IEAARAG+AG+GFAVVA E++ 
Sbjct: 416 GLKDNMHRLGQQSEAIGHVMNVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRK 475

Query: 590 LAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNE 649
           LAE+   + +++  +I  +         L     D +D+ V AI    D   ++  S  +
Sbjct: 476 LAEKTMGATKEVGDSIRAIQ-------GLARTNVDSMDEAVSAI----DGAARLSSSSGD 524

Query: 650 SAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSII----EE 705
              +I    H A              Q I A +EE +A +EE+T S E++N I     E 
Sbjct: 525 LLKEIVRTAHDAAG----------QVQAIVAAAEEQSAASEEITRSVEDINRIARDSGEL 574

Query: 706 IRGIAEEVTQVAER 719
           IR    ++  +AE+
Sbjct: 575 IRAANNDIRDLAEQ 588



 Score = 40.4 bits (93), Expect = 3e-07
 Identities = 46/240 (19%), Positives = 94/240 (39%), Gaps = 19/240 (7%)

Query: 311 LYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELS----DSFNKMAENVKNLM 366
           L   R   +  E+      +  NG      TVK  ++L++L+    D+ +++ +  + + 
Sbjct: 373 LEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLATGLKDNMHRLGQQSEAIG 432

Query: 367 KTMDM-----DKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVAD 421
             M++     D+  L  L   +       A   F   ADE R+   L +    A   V D
Sbjct: 433 HVMNVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRK---LAEKTMGATKEVGD 489

Query: 422 LIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELEN 481
            I+ ++         + +    + GA   ++   +   ++   A D + ++Q        
Sbjct: 490 SIRAIQGLARTNVDSMDEAVSAIDGAARLSSSSGDLLKEIVRTAHDAAGQVQA------- 542

Query: 482 TYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGED 541
               A+E  +A+EE  +S E+I   +    E +  A + ++ +    +EL + I  L  D
Sbjct: 543 IVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRDLAEQAEELHQLINALKND 602