Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 800 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  131 bits (329), Expect = 2e-34
 Identities = 118/505 (23%), Positives = 217/505 (42%), Gaps = 79/505 (15%)

Query: 279 IPKAPFVAVITDTRNEIIIISLLGLLLSILIAL-YTGRKITKPIEELKKGTEEFGNGNYD 337
           +P    +A ++  RN + ++ ++ + ++I  AL +  R++ +P+  ++       +G+  
Sbjct: 300 VPAVTALAAVSRLRNTVGVLGVVTMFVAIGGALLFLRRELLRPLASIEGYVASVADGDLS 359

Query: 338 YKTTVKTGDELQELSDSFNKMAENVK-----------------------NLMKTMDMDKV 374
                +   EL  L+   N M   +K                       N +  ++   +
Sbjct: 360 GMLRGEFRGELGRLASGVNHMVAELKEKLGFAQGVLHSLTVPCVVTGRDNRVTFVNQPFI 419

Query: 375 ELATLLTNVSDVMNRVA------KGDFTARADESRENNNLEKAINTAVSNVADLIKELRE 428
           EL  L    S ++ R A      KGD +       E     +AI   + + +  ++ +R 
Sbjct: 420 ELLDLQVPPSALLGRSATEVLQGKGDGSGSTSRCLETGECVEAIEREMRDTSGHVRRVRL 479

Query: 429 EVELLN----------------IQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKL 472
           +   LN                  I++ E+ ++       +VA  A Q+A   +D++ +L
Sbjct: 480 DAAPLNDLDGSLIGAIALIADLTVIREQEERVRSQNAMMLEVAAQAEQIATGVADETEEL 539

Query: 473 QESSEE-----------LENTYEGAKEVYSA-------AEETVKSSEEIKENSETGVEKV 514
               E            LENT    +++          A+E V S+ E  E +  G E +
Sbjct: 540 ARQVEHGADGARQQVSCLENTGAAVRQLAELLEAAAQHADEAVNSAGEAGEKARQGTEIM 599

Query: 515 ENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAG 574
           E + + MQ +  +   L  S+  LGE  + I  + G+I DIA+QT LLALNA+IEAARAG
Sbjct: 600 ERSAAAMQRMHGLSMSLSSSMHQLGEQTESIGSILGVINDIADQTNLLALNAAIEAARAG 659

Query: 575 DAGKGFAVVASEIKSLAE-------EIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVD 627
           ++G+GFAVVA E++ LAE       E++ S+ +I  T     KR ++ +D   +G   V+
Sbjct: 660 ESGRGFAVVADEVRKLAERTVAATGEVRNSIRNIQETTRENLKRTEEAVDAVREGTRLVE 719

Query: 628 KGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSE---- 683
               A+ ++    + I   + E    I  +    + A +    A++  + IA  +E    
Sbjct: 720 ASGAALGDI----VSISMHMGEQIRSIATLSQEHERAHDAINDAVEEVRGIANATESGMR 775

Query: 684 EFTATAEEVTASTEELNSIIEEIRG 708
                  +++ S+ EL  +I  +RG
Sbjct: 776 HSGGVVRDLSRSSSELLQLIARLRG 800