Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 771 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  131 bits (330), Expect = 1e-34
 Identities = 77/298 (25%), Positives = 149/298 (50%), Gaps = 7/298 (2%)

Query: 423 IKELREEVELLNIQIQKVEDELKGAEETATQVAEAAT-------QVAEAASDQSAKLQES 475
           + E R +   +  Q +++ +    AE  +  ++EAA        Q A  +  Q  +  E+
Sbjct: 471 VTEARRQQAFIAEQNKRIGEAATQAETVSQNLSEAAATLEGQIDQAARGSDIQRQRTAEA 530

Query: 476 SEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSI 535
           +  +E       EV   A    + +E  +  ++ G   +++++  ++    + D L + +
Sbjct: 531 ATAMEQMNASVMEVARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTLREHM 590

Query: 536 KMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIK 595
             LG+  + I  V  +I DIA+QT LLALNA+IEAARAG+AG+GFAVVA E++ LAE+  
Sbjct: 591 GELGKQAEDIGRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTM 650

Query: 596 KSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKIN 655
            +  +++  I+G+       ID   K  D ++ G   + +  + L +I   V  +A  + 
Sbjct: 651 NATREVDTAIKGIQTSARSNIDNTRKATDAIEVGTGMVGKSGEILREIVRLVETTADSVR 710

Query: 656 GIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEV 713
            I   ++  S  +E   ++  EI  ++ E     ++   + +++ S+ +E+ G+ EE+
Sbjct: 711 NIATASEEQSAASEQITRSTDEINRIASETADAMQQSARAVQDVASLADELHGVIEEM 768



 Score = 33.1 bits (74), Expect = 5e-05
 Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 27/217 (12%)

Query: 514 VENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARA 573
           V  A++  ++ITN ID   K  K  G + + +  VT L        G   L   +  AR 
Sbjct: 420 VGRAMNERKAITN-IDVTIKGHK--GGEVQVLANVTYLADTDGNIFGGFCLYLDVTEARR 476

Query: 574 GDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKD----EVDKG 629
             A      +A + K + E   ++ E ++  +      ++  ID   +G D       + 
Sbjct: 477 QQA-----FIAEQNKRIGEAATQA-ETVSQNLSEAAATLEGQIDQAARGSDIQRQRTAEA 530

Query: 630 VIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATA 689
             A++++N +++++  +              A  A+E  E A   AQE A+  ++   T 
Sbjct: 531 ATAMEQMNASVMEVARN--------------AAGAAEQAETARHKAQEGASALDDSVRTI 576

Query: 690 EEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKSSQ 726
            E     + L   + E+   AE++ +V + +   + Q
Sbjct: 577 REAKQLADTLREHMGELGKQAEDIGRVLDVIADIADQ 613



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 27/186 (14%)

Query: 346 DELQELSDSFNKMAENVKNLMKTMD--MDKVELATLLTNVSDVMNRVAKGDFTARADE-- 401
           D L+E      K AE++  ++  +    D+  L  L   +       A   F   ADE  
Sbjct: 584 DTLREHMGELGKQAEDIGRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVR 643

Query: 402 ---------SRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETAT 452
                    +RE +   K I T+  +  D  ++  + +E+    + K  + L+       
Sbjct: 644 KLAEKTMNATREVDTAIKGIQTSARSNIDNTRKATDAIEVGTGMVGKSGEILREIVRLVE 703

Query: 453 QVAEAATQVAEAASDQSAKLQ--------------ESSEELENTYEGAKEVYSAAEETVK 498
             A++   +A A+ +QSA  +              E+++ ++ +    ++V S A+E   
Sbjct: 704 TTADSVRNIATASEEQSAASEQITRSTDEINRIASETADAMQQSARAVQDVASLADELHG 763

Query: 499 SSEEIK 504
             EE++
Sbjct: 764 VIEEMR 769