Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 804 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  123 bits (308), Expect = 4e-32
 Identities = 72/287 (25%), Positives = 140/287 (48%), Gaps = 3/287 (1%)

Query: 427 REEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGA 486
           R+ +E    Q  +V +E   AE T   +A    +   ++  Q+  + ES   +E      
Sbjct: 519 RDTIEAAARQAGEVSEE---AEATMRTLAADIDETGRSSERQAQFIAESVVAIEELNATV 575

Query: 487 KEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKIN 546
           +E+   A  T  ++++ K+ ++ G   V  ++  M ++  +++E+ + +  LG     + 
Sbjct: 576 REIADNASRTAHNAQDTKQQADNGAAVVAESLRTMNNLRELVEEMRRELGGLGAQADSVG 635

Query: 547 EVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIE 606
            V  +I DIA+QT LLALNA+IEAARAG+AG+GF+VVA E++ LAE+   +  ++   I 
Sbjct: 636 NVIKIINDIADQTNLLALNAAIEAARAGEAGRGFSVVADEVRKLAEKTVSATREVADAIS 695

Query: 607 GVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASE 666
            +           L+ +DE    V      ++AL  I +    ++  +  I   A+  S 
Sbjct: 696 AIQDGTRRCTASALRVEDETRNNVEQAGRTDEALKSIVDLAGATSGMVTEIATAAEQQSA 755

Query: 667 NTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEV 713
            TE   ++A ++  +++E      +   + + ++  I  + GI  ++
Sbjct: 756 ATEQIARSAADMGTMADETRNAMRQAAGNVQHMHGTISTLNGIITDM 802



 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 41/212 (19%), Positives = 88/212 (41%), Gaps = 12/212 (5%)

Query: 329 EEFGNGNYDYKTTVKTGDELQELSDSFNK-------MAENVKNLMKTMD--MDKVELATL 379
           ++  NG      +++T + L+EL +   +        A++V N++K ++   D+  L  L
Sbjct: 594 QQADNGAAVVAESLRTMNNLRELVEEMRRELGGLGAQADSVGNVIKIINDIADQTNLLAL 653

Query: 380 LTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQK 439
              +       A   F+  ADE R+   L +   +A   VAD I  +++          +
Sbjct: 654 NAAIEAARAGEAGRGFSVVADEVRK---LAEKTVSATREVADAISAIQDGTRRCTASALR 710

Query: 440 VEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKS 499
           VEDE +   E A +  EA   + + A   S  + E +   E      +++  +A +    
Sbjct: 711 VEDETRNNVEQAGRTDEALKSIVDLAGATSGMVTEIATAAEQQSAATEQIARSAADMGTM 770

Query: 500 SEEIKENSETGVEKVENAISRMQSITNVIDEL 531
           ++E +         V++    + ++  +I ++
Sbjct: 771 ADETRNAMRQAAGNVQHMHGTISTLNGIITDM 802



 Score = 40.4 bits (93), Expect = 4e-07
 Identities = 27/131 (20%), Positives = 60/131 (45%)

Query: 587 IKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKES 646
           I++ A +  +  E+   T+  +   ID+T     +    + + V+AI+E+N  + +I ++
Sbjct: 522 IEAAARQAGEVSEEAEATMRTLAADIDETGRSSERQAQFIAESVVAIEELNATVREIADN 581

Query: 647 VNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEI 706
            + +A      K  A N +     +L+    +  L EE       + A  + + ++I+ I
Sbjct: 582 ASRTAHNAQDTKQQADNGAAVVAESLRTMNNLRELVEEMRRELGGLGAQADSVGNVIKII 641

Query: 707 RGIAEEVTQVA 717
             IA++   +A
Sbjct: 642 NDIADQTNLLA 652