Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 818 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  131 bits (330), Expect = 1e-34
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 28/348 (8%)

Query: 389 RVAKGDF-TARADESRENNNLEKAINTAVS--NVADLIKELREEVELLNIQIQKVEDELK 445
           R  KGD  TAR   +  ++    AI   V   ++ DL K   E +   N  I K  D   
Sbjct: 482 RTKKGDLRTARLTAAPLHDRDGNAIGAIVLFLDLTDL-KRQEEAIRRTNEAISKAADH-- 538

Query: 446 GAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKE 505
            A+  + QV+ AAT++A       ++++ES+   +   E   E  +A EE   ++ E+  
Sbjct: 539 -ADSISQQVSSAATEIA-------SQVEESARGSDIQRERTTESATAIEEMNATTMEVAR 590

Query: 506 NSETGVEKVENAISRMQS----ITNVIDELGK----------SIKMLGEDGKKINEVTGL 551
           N+    E+ + AI + +S    +  V+D +G           S++ LG     I +V  +
Sbjct: 591 NASLAAEQADTAIRQARSGEEVVQRVVDAIGTVRERSETLKHSLETLGVQADAIGQVMVV 650

Query: 552 IKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKR 611
           I DIA+QT LLALNA+IEAARAG+AG+GFAVVA E++ LAE+   +  ++   +  +   
Sbjct: 651 INDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATREVGEAVHAIQSG 710

Query: 612 IDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGA 671
               I    K  + V +      E   AL  I   V  +A ++  I   A+  S  +E  
Sbjct: 711 ARGNIQEMDKAAEAVGESTRLAGEAGKALGTIVSIVETTADQVRNIATAAEQQSAASEEI 770

Query: 672 LKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAER 719
            + + EI+A++ E      +   +  EL+ + +E+R +  E+ QV ++
Sbjct: 771 NRASDEISAIASETAQAMAQSAEAVTELSRLAQELREVIREMVQVGQQ 818



 Score = 59.3 bits (142), Expect = 7e-13
 Identities = 68/365 (18%), Positives = 150/365 (41%), Gaps = 51/365 (13%)

Query: 262 SPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLLLSILIALYTGRKITKPI 321
           +P+ D+DGN +G I                   ++ + L  L               K  
Sbjct: 496 APLHDRDGNAIGAI-------------------VLFLDLTDL---------------KRQ 521

Query: 322 EELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKNLMKTMDMDK---VELAT 378
           EE  + T E  +   D+  ++      Q++S +  ++A  V+   +  D+ +    E AT
Sbjct: 522 EEAIRRTNEAISKAADHADSIS-----QQVSSAATEIASQVEESARGSDIQRERTTESAT 576

Query: 379 LLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQ 438
            +  ++     VA+    A A+++       ++    V  V D I  +RE  E L   ++
Sbjct: 577 AIEEMNATTMEVARNASLA-AEQADTAIRQARSGEEVVQRVVDAIGTVRERSETLKHSLE 635

Query: 439 KVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVK 498
            +  +     +    + + A Q    A + + +   + E        A EV   AE+T+ 
Sbjct: 636 TLGVQADAIGQVMVVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMN 695

Query: 499 SSEEIKENSETGVEKVEN-AISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAE 557
           ++ E+ E     V  +++ A   +Q +    + +G+S ++ GE GK +  +  +++  A+
Sbjct: 696 ATREVGE----AVHAIQSGARGNIQEMDKAAEAVGESTRLAGEAGKALGTIVSIVETTAD 751

Query: 558 QTGLLALNASIEAARAGD---AGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDD 614
           Q   +A  A  ++A + +   A    + +ASE      +  ++V +++   + + + I +
Sbjct: 752 QVRNIATAAEQQSAASEEINRASDEISAIASETAQAMAQSAEAVTELSRLAQELREVIRE 811

Query: 615 TIDLG 619
            + +G
Sbjct: 812 MVQVG 816