Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  129 bits (325), Expect = 4e-34
 Identities = 149/671 (22%), Positives = 284/671 (42%), Gaps = 117/671 (17%)

Query: 45  NSVNDNLNIFQESIENVIVEFETTTSYTASLDTFSELLVN---DDKEVLYDFAEKMKKSS 101
           + ++ + + F+     ++ E E   S    L    + L N   D   VL D  + ++ S 
Sbjct: 114 SQLDGSFSTFERDSLAMLTEREAALSKQEQLIGLKKKLENAADDASSVLLDIID-LENSQ 172

Query: 102 EVDLVAFTDKNGNIISSSDNVQTNLKPVISKLLSNEVQSSFEIISGSEASKYSDYKVNNI 161
             D  +       I +S  N+ T     I+ L++NE  S  E+I     SK  DY ++  
Sbjct: 173 NPDAQSIAASASAIDTSMGNIITT----IADLVTNEEMSKHELI-----SKELDYILSET 223

Query: 162 NDALAICVVAPVYHSGELVGTVTLVDIVNNDDYWVDSLKERTGNEATIFLKNVRISTTVQ 221
            + L         H+ +++   TL   VN D   V +L E  G ++ + LK  +++    
Sbjct: 224 KNKLEYV----NRHAQDIIDADTLKS-VNEDTKKVLALLE--GPDSMVLLKATQLNHAKS 276

Query: 222 TNGQDATGTKCSDEVYNIITNHQDYVGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPK 281
              Q AT  K   +V  I  N                     +ED   N+  +      +
Sbjct: 277 AMNQLATIEK---DVKVIDRN---------------------MEDVSNNIESVAANMSQE 312

Query: 282 APFVAVITDTRNEIIIISLLGLLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTT 341
              +A I       II+ L+ ++ +++I+      + + + ++        +GN  +K  
Sbjct: 313 T--IAKIDAASIRTIIVVLIAIVAAVIISFAVVAPLKRSLYQVNNALNVLASGNLTHKLD 370

Query: 342 VKTGDELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADE 401
               DE  EL+ + N++ ++++               L+  + D  N++A     A A++
Sbjct: 371 DSGHDEFAELAKNCNRLVDSLRG--------------LIVGILDRSNQLA-----AAAEQ 411

Query: 402 SRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQV 461
           +        AI    ++                  IQ+ + ++       T+++ +A QV
Sbjct: 412 T-------SAITAQTTS-----------------GIQEQKSQVDQVATATTELSSSAQQV 447

Query: 462 AEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRM 521
           + +A D  A+++++ +E       AK + + AEE  ++                     +
Sbjct: 448 SMSADDALAQIKQADQE-------AKHMRTIAEENKRT---------------------I 479

Query: 522 QSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFA 581
            ++ + + + G+ I  +  D   I  +  +I+ IAEQT LLALNA+IEAARAG+ G+GFA
Sbjct: 480 LALADEVAKAGQVINKVQSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFA 539

Query: 582 VVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALL 641
           VVA E++SLA   + S  +I   IE + +     +     G+ + +  V   ++ N AL 
Sbjct: 540 VVADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACVDKTEQANLALE 599

Query: 642 KIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNS 701
            I +SV+++      I H AQ  +  ++   +  + IAA+SEE    A++   S+ ++  
Sbjct: 600 TISQSVHKAYDAGTHIAHAAQEQNVVSQQVSEKLEHIAAISEETAIGADQTAQSSHQVAK 659

Query: 702 IIEEIRGIAEE 712
           + EE++    E
Sbjct: 660 LAEELQASVGE 670