Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  124 bits (312), Expect = 9e-33
 Identities = 116/484 (23%), Positives = 218/484 (45%), Gaps = 81/484 (16%)

Query: 233 SDEVYNI-ITNHQDYVGTAN-----VLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVA 286
           S+++Y I + +H+  +   +     V  S+  T+     D+ GN  G +       P  A
Sbjct: 76  SEQIYQITVVDHRGKLLAEDKQAEIVAASDLQTRELQFSDQ-GNPTGRLTIAFSTLPVKA 134

Query: 287 VITDTRNEIIIISLLGLLLSILIA-LYTGRKITKPIEELKKGTEEFGNGNYD--YKTTVK 343
            ++D      + +LL L  S+L+  +   R +  P++++    EE  NG+ D  ++  V+
Sbjct: 135 QLSDLLLGYFLQALLILAGSLLVIFIILKRLVISPLDKVVAALEEIANGDGDLSHRLPVE 194

Query: 344 TGDELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESR 403
           + DE+ +L+++FN   E +   +  +     E + LL            GD  A    S+
Sbjct: 195 SEDEIGKLANAFNGFVEQIHGTITRVH----ETSGLLL-----------GDAKALGTLSQ 239

Query: 404 ENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAE 463
            NN                               Q+V+ +LK  E   T    A TQ++ 
Sbjct: 240 SNN-------------------------------QRVQAQLKETEAAVT----AVTQLSA 264

Query: 464 AASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQS 523
           +A+                     EV   A+ T  ++ +     + G  + ++ ++  + 
Sbjct: 265 SAN---------------------EVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQ 303

Query: 524 ITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVV 583
           +   +    +S+  L ++ ++I+EV  +I  IAEQT LLALNA+IEAARAG+ G+GFAVV
Sbjct: 304 LAGELARSAQSVSQLQQETQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVV 363

Query: 584 ASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKI 643
           A E++SLA   +++  +I   I+ V  R+ +T+++    +   ++GV   +E+   L K+
Sbjct: 364 ADEVRSLASRTQQATGEIQKMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKV 423

Query: 644 KESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSII 703
            + V+  +     + H AQ  +  TE   +   ++A +S   +  +E +  S+E L    
Sbjct: 424 TDLVSNISNMNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQG 483

Query: 704 EEIR 707
           E +R
Sbjct: 484 ERLR 487