Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (385), Expect = 4e-41
 Identities = 131/556 (23%), Positives = 255/556 (45%), Gaps = 51/556 (9%)

Query: 189 VNNDDYWVDSLKERTGNEATIFLKN----VRISTTVQ-TNGQDATGTKC--SDEVYNIIT 241
           +N+    VD     TG  AT+F+++    VRI+++++  +G  A GT    +   Y  + 
Sbjct: 108 INSSKSKVDRFANLTGGTATVFVRDGDDFVRIASSLKKADGSRALGTFLGKTHPGYPTLI 167

Query: 242 NHQDYVGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLL 301
             + Y G A + G +Y+T Y PI+D  G V+GI++ G      +  +    N+I +    
Sbjct: 168 KGEVYEGYAKLFGKDYMTVYRPIKDAQGQVIGILYIGFEITQSLTQLQAAVNKITLEETG 227

Query: 302 GLLL-----SILIA---LYTGRKITKPIEE---LKKGTEEFGNGNYD---------YKTT 341
             LL     ++L+A      G  +T+ + +   L + T++     Y          Y  T
Sbjct: 228 SFLLMRKADNVLVANPKFNAGEPVTESMLDGLTLSQATQDQSEFRYTNSKNQPMFAYTQT 287

Query: 342 VK----------TGDELQE---LSDSFNKMAENVKNLMKTMDMDKVELATL--LTNVSDV 386
           V             +EL E   L  + N +      ++ T+ +  V + +L  L  +   
Sbjct: 288 VNGWNWMLIGQVNANELNEESLLLLTINAIVAVTGIVLITVLLSFVLIRSLKPLHALQRH 347

Query: 387 MNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKG 446
           M  +  GDF+     S  ++  E  ++   ++V+ +  ELR+ +  L   +Q +E +   
Sbjct: 348 MEILGTGDFSHPLPPSAYDSQNE--VDKITTSVSTMSSELRQLISALQASVQSIEQQASK 405

Query: 447 AEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKEN 506
           A+  A Q  E A  + +     +  ++E S  +       ++V + A++    S+++   
Sbjct: 406 AQRIAKQNGEEAQALMQQTDQIATAIEEMSTSI-------RDVANHAQDGANQSQQVDLA 458

Query: 507 SETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNA 566
           ++ G ++    +  +  ++  +    ++++ + ++ + I++VT +I  IAEQT LLALNA
Sbjct: 459 AKEGQQQQTQVVQDLLKLSQQLSSSHQAVEKVSQESEAISKVTEVINSIAEQTNLLALNA 518

Query: 567 SIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEV 626
           +IEAARAG+ G+GFAVVA E+++LA+  + S+ +I+ TI+ +  ++  T     +     
Sbjct: 519 AIEAARAGEQGRGFAVVADEVRTLAQRTQSSILEISQTIDKLQSQVKTTTSQMAQSHQLG 578

Query: 627 DKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFT 686
                  +E    L +I   + E A+    I    +  S   +    N  +I+ L+ E  
Sbjct: 579 IASANQGEETGKQLEEITRRIGELAISSRNIASATEQQSSVAQEITHNLHQISELANEGE 638

Query: 687 ATAEEVTASTEELNSI 702
             A E   S  +L+S+
Sbjct: 639 HRAAETVNSANDLSSL 654