Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 641 a.a., putative TrkA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  147 bits (370), Expect = 2e-39
 Identities = 112/513 (21%), Positives = 239/513 (46%), Gaps = 21/513 (4%)

Query: 7   IIGYILTGILVSPYFLNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGKISLITG 66
           ++GY++ G+ + P    + +  +SI     +GV ++LF+VG+ L+     ++ +  L  G
Sbjct: 30  VLGYLVAGVAIGPLLGLVGQETQSIQHFAEFGVVLMLFLVGLELDAKQLWQMRQRLLGLG 89

Query: 67  LGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDIDKLYGKISIG 126
             Q+L T      +++ L      ++ + +    SST I+++  ++KG      G+    
Sbjct: 90  GLQVLLTTGAVAGLALILNQPWQIALALGMIFAMSSTAIVLQSFNEKGLAKTEGGRGGFS 149

Query: 127 FLIVQDIVAMAILVL-----ISAFNVQSGAGELLFLI-----ISKIVLI--LTAIYIFTK 174
            L+ QDI  + IL +     +SA  + +G  ++  +       + +V++  + A+    +
Sbjct: 150 VLLFQDIAVIPILAILPLLALSAPQLDAGHEDMSLVAGLPAWANALVVLGAIAAVVFGGR 209

Query: 175 YALSNFISYASKN--QEFLFLFSLMWCFTLASLFHLLGFSSEIGALIAGIVLAIFPERYE 232
           +       Y +++  +E     +LM    +A+L  L+G S  +G  +AG+VLA    R+E
Sbjct: 210 FLTRPLFGYVARSGLREVFTAAALMMVIGIAALMSLVGLSPALGTFLAGVVLASSEFRHE 269

Query: 233 IASKVRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILSIFVLFGNPIIVMILMGAFGY 292
           + S + P +   L LFF+ +G  + FE   +     + L++ V+    +++++L   F  
Sbjct: 270 LESTIEPFKGLLLGLFFITVGAGIDFEMLLSQFALVLGLALGVMVIKALVLLLLAKIFRL 329

Query: 293 TKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGSSYFITYSER 352
           +    +L  L++AQ  EF  ++     + G    E+  +++++  +++  +       ER
Sbjct: 330 SGSDKWLFALSLAQAGEFGFVLLGYSQQQGIFGSELGGLLSMVVALSMFLTPGLFILYER 389

Query: 353 IYALLSNYLSIFEKKTKISEKDFKNKNTGEIILFGADRTGKNILNVIENSKERFLIIDYN 412
           I       L    + T   E D  ++  G +I+ G  R G+ +  ++  +  + +++D  
Sbjct: 390 I------ILPRVTRSTNEREADTIDEQ-GPVIIAGIGRFGQIVNRLLRANGVKTVVLDRE 442

Query: 413 PKIIKNLSKRGYNSVYGDASNLELLNELNFKESKMLISTISDIETDILLIKTILKSNKNA 472
              ++ L +    S +GD SN ELL+    + +KML+  I D+E    L++ + +     
Sbjct: 443 YAQVERLREIEMKSFFGDVSNPELLHTAGIESAKMLVVAIDDVEGATALVRHVRQQYPQV 502

Query: 473 IIIVIAHKIEDAIKLYEEGASYVIMPHFLGSIH 505
            I+  A        L E GA +V+   F  +++
Sbjct: 503 AILARAFDRGHFYALTEAGADWVVSESFYSALN 535