Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 547 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella sp. ANA-3

 Score =  133 bits (335), Expect = 2e-35
 Identities = 123/507 (24%), Positives = 232/507 (45%), Gaps = 40/507 (7%)

Query: 5   PLIIGYILTGILVSPYFLNIVRFEESI---STLGHYGVTILLFMVGISLNPGYFKEIGKI 61
           P +IGY++ G ++  + +     +ES+     L + GVT+LLF +G+ L+    + + K 
Sbjct: 22  PPLIGYLVAGFVLFVFGIE----KESLPLLQELANLGVTLLLFAIGLKLD---IRSLFKA 74

Query: 62  SLITG------LGQILFTFSI---GFL-ISVFLGYSLIESMYISIALTFSSTIIIMKLIS 111
            +  G      L  +LF   +   GF+ +S   G  + +   I+ AL+FSST+  +K++ 
Sbjct: 75  EVWAGSSIHLVLSMVLFIPILKIFGFIGLSQLDGLGIAQLSLIAFALSFSSTVFAIKVLE 134

Query: 112 DKGDIDKLYGKISIGFLIVQDIVAMAILVLISAFNVQSGAGELLFLIISKIVLILTAIYI 171
           DKGD+  LYG+++IG LI+QDI A+  L +         A  LL L ++K ++       
Sbjct: 135 DKGDVQSLYGRVAIGILIMQDIFAVIFLTISKGAVPSVWALALLLLPLAKPLI------- 187

Query: 172 FTKYALSNFISYASKNQEFLFLFSLMWCFTL-ASLFHLLGFSSEIGALIAGIVLAIFPER 230
              Y   + + +     E L LF L+    + A LF  +G   ++GALI GI+LA   + 
Sbjct: 188 ---YKAFDRVGHG----ELLVLFGLVMALVVGAWLFESVGLKPDLGALIIGILLAGHKKA 240

Query: 231 YEIASKVRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILSIFVLFGNPIIVMILMGAF 290
            E+A  +   ++ FL+ FF+ +G+     T  + ++ A+++ +  L    ++ + L+  F
Sbjct: 241 SELAKSLFYFKELFLVAFFLTIGLN-GLPTVSDVVLAALLVLLVPL--KILLFVYLLTRF 297

Query: 291 GYTKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGSSYFITYS 350
               +T  LA   +   SEF LI+A++    G +  + + +I +    +   ++   T  
Sbjct: 298 KLRSRTSMLASFNLGNFSEFGLIVAAVATSKGWLPPQWLVIIAVALSFSFLFAAPLNTAV 357

Query: 351 ERIYALLSNYLSIFEKKTKISEKDFKNKNTGEIILFGADRTGKNILNVIENSKE-RFLII 409
             IY      L   EK     E           ++ G  R G    + +    +   L I
Sbjct: 358 GNIYQRFQQRLVRLEKPPLHPEDRPIAIGNPRFLILGMGRIGSGAYDELRARFDGEILGI 417

Query: 410 DYNPKIIKNLSKRGYNSVYGDASNLELLNELNFKES-KMLISTISDIETDILLIKTILKS 468
           ++  +++      G N V GDAS+ +   +L+   + ++++  +     ++  ++ + K 
Sbjct: 418 EHKQELVDLHRANGRNVVQGDASDTDFWEKLDRAPNLELVLLAMPHHAGNLFAVEQLKKL 477

Query: 469 NKNAIIIVIAHKIEDAIKLYEEGASYV 495
           N    +  I    +DA  L   G   V
Sbjct: 478 NYQGKLSAIVQYGDDAASLRSSGVHSV 504