Pairwise Alignments

Query, 70 a.a., helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 121 a.a., winged helix-turn-helix domain-containing protein from Methanococcus maripaludis JJ

 Score = 57.4 bits (137), Expect = 4e-14
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 1  MYFNEIQKELNLNAGTLTRIVSDLMEYKFIYKRVE--DESKHLSKTYYGITDLGKKAIEI 58
          +YF +I KEL+     L+R++S+L E   + KR E  DE   + K YY +T+LGK AIEI
Sbjct: 24 LYFGQIHKELDKPKSNLSRVISELQEEGLVNKRTEETDEDGRIPKNYYSLTNLGKIAIEI 83

Query: 59 YKIKHEIEEE 68
          Y+ + ++ +E
Sbjct: 84 YQKEDKMLKE 93