Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 304 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 9/175 (5%)

Query: 151 ENQSSTKIRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSD 210
           +  ++  +RD  ++ +L+ TG RVSE++ L     + + G  R    K ++ER V     
Sbjct: 126 DTSTALGLRDRALLEVLYATGFRVSELVGLTLTQLNLDMGVVRTIG-KGNKERLVPLGEI 184

Query: 211 TLE-LLKCLASYN---FKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKI 266
           + + L++ LA       K    D LF + +Q+     A   ++TR     + K   E   
Sbjct: 185 SSDWLVRYLAESRPVLLKGRSSDGLFITGHQKKDNNDA---RMTRQMAWLLIKKYGELVG 241

Query: 267 QQNKRYVVHSLRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSH-SRQRKEQM 320
               R   H LRH  A  LLN G  + +V+ +LGH  + TT  Y+H +R+R +++
Sbjct: 242 IPRDRISPHVLRHAFATHLLNCGADLRIVQLLLGHADISTTQIYTHVARERLKEL 296