Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 295 a.a., tyrosine recombinase XerC from Dyella japonica UNC79MFTsu3.2

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 14/156 (8%)

Query: 158 IRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSDTLELLKC 217
           +RD  ++ + + +G R+SE++ L++ D D   GE R+   K  + R V      +E L+ 
Sbjct: 132 VRDRAMLELFYSSGLRLSELVGLRWLDLDLTQGEVRVLG-KGSKTRIVPVGRHAVEALRA 190

Query: 218 LASYNFKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKIQQNKRYV-VHS 276
           L      K P+  +F+         I+ R    R        LK+    Q   ++V  H 
Sbjct: 191 LGEAE-GKAPETPVFRGRGG---APISPRTVQAR--------LKQLALAQGFAKHVHPHL 238

Query: 277 LRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSH 312
           LRH  A  +L     +  V+E+LGH  + TT  Y+H
Sbjct: 239 LRHTFASHMLESSGDLRAVQELLGHADIATTQIYTH 274