Pairwise Alignments

Query, 120 a.a., helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 121 a.a., winged helix-turn-helix domain-containing protein from Methanococcus maripaludis JJ

 Score = 80.1 bits (196), Expect = 9e-21
 Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 9/114 (7%)

Query: 1   MILKLLAKKYVREILEMIEENEELYFSEIMNNLDTHQGSVGRLLSEMVEYDLLSKR--ED 58
           M LK+L+K   +EIL ++ E  ELYF +I   LD  + ++ R++SE+ E  L++KR  E 
Sbjct: 1   MFLKILSKSNAKEILMLLNEYGELYFGQIHKELDKPKSNLSRVISELQEEGLVNKRTEET 60

Query: 59  EEGKKLNKTYYSITEHGKLALKIYEYSDKLENIRESKFKMEIKGGKNTNIQTEH 112
           +E  ++ K YYS+T  GK+A++IY+  DK+   +ES       G  N N++  H
Sbjct: 61  DEDGRIPKNYYSLTNLGKIAIEIYQKEDKMLKEKES-------GNVNINVENNH 107