Pairwise Alignments

Query, 120 a.a., helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 94 a.a., transcriptional regulator from Methanococcus maripaludis JJ

 Score = 74.3 bits (181), Expect = 4e-19
 Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 3/91 (3%)

Query: 2  ILKLLAKKYVREILEMIEENEELYFSEIMNNLDTHQGSVGRLLSEMVEYDLLSKREDEEG 61
          ILKLL+K Y  ++L ++ E  E+YF EI+N LD H+ ++ +LL+E+ E  L+S +E  E 
Sbjct: 3  ILKLLSKAYATDVLNLLNERGEMYFGEILNELDIHKSNLSKLLAEIEENGLVSLKEVSEN 62

Query: 62 KKLNKTYYSITEHGKLALKIYEYSDKLENIR 92
          K++ K YY +T+ G   L+I    +++E I+
Sbjct: 63 KRMPKKYYKLTKKG---LEIINRCNEIEKIQ 90