Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  300 bits (767), Expect = 1e-85
 Identities = 161/370 (43%), Positives = 233/370 (62%), Gaps = 7/370 (1%)

Query: 1   MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
           M +FK LGLS+ I+  L   GF  PTPIQ QAIP++++   D++G AQTGTGKTAAFG+P
Sbjct: 1   MSTFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKD-HDLIGLAQTGTGKTAAFGLP 59

Query: 61  ILETIDEHSR-----NTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQI 115
           ++E +    R     N +AL+LAPTREL  Q+A  +        L +  V GG SI++Q 
Sbjct: 60  MIEKLVADGRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQT 119

Query: 116 RELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVST 175
            +L RGV I+V TPGR+LD +SR+ + L    Y+VLDEAD+ML++GFI D+ +I K V  
Sbjct: 120 EQLARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPK 179

Query: 176 DKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRD-KFELLSR 234
           +++ LLFSAT+P  I +LA  Y+ +   ++V          +Q  + +  +D K  +L +
Sbjct: 180 NRQTLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQ 239

Query: 235 IIDTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINV 294
            +    +   LIF +TK   +++   L+  G+ A  +HG+ +Q QRE+ L  F+  +I V
Sbjct: 240 TLTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRV 299

Query: 295 LVATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFK 354
           LVATDVAARGIDI  +THV N+D+P+ P++YVHRIGRT R G+ G AI F  P E R  +
Sbjct: 300 LVATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLR 359

Query: 355 YIQKIAKTEI 364
            I+K+   +I
Sbjct: 360 DIEKLMGIQI 369