Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  286 bits (731), Expect = 1e-81
 Identities = 155/372 (41%), Positives = 226/372 (60%), Gaps = 6/372 (1%)

Query: 4   FKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
           F++   + EIL+AL + G+   TPIQ  AIP +  G+ D++  AQTGTGKTAAF +PIL+
Sbjct: 3   FESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQ-DVLASAQTGTGKTAAFALPILQ 61

Query: 64  TIDE-----HSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIREL 118
            + +      +   +ALILAPTREL  Q+A  I +      L V  V+GG   D Q ++L
Sbjct: 62  KLLDTPKAREATKARALILAPTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQKL 121

Query: 119 RRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKR 178
           R+G  I+V TPGR+L+H+    + L  V ++VLDEAD ML+MGFI D+++++++ + +++
Sbjct: 122 RKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRMLDMGFIADIQKLIQACNKERQ 181

Query: 179 MLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDT 238
            L+FSAT    + KLA   M+++ ++   R     T   Q  Y +  R K ELLS +I  
Sbjct: 182 TLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIGR 241

Query: 239 EKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVAT 298
           +     L+F  T+ D +++   LN  G  +  +H +  Q  R + L  F   KI VLV+T
Sbjct: 242 KNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVST 301

Query: 299 DVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQK 358
           +VAARG+DI DL +VVNFD+P  PE YVHR+GRTGRAGK G AI+FV   E R    I+K
Sbjct: 302 EVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIEK 361

Query: 359 IAKTEIKREEVP 370
           +    +KR  +P
Sbjct: 362 LIGQRLKRIVMP 373