Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  285 bits (728), Expect = 6e-81
 Identities = 151/376 (40%), Positives = 235/376 (62%), Gaps = 4/376 (1%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           +F +LGLS E L A+E+ G+T PTPIQ QAIP +  G RD++G AQTGTGKTA+F +P++
Sbjct: 2   TFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMG-RDVLGIAQTGTGKTASFTLPMI 60

Query: 63  ETIDE---HSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELR 119
           + +      +R  ++LILAPTRELA QV+E        ++L++  + GG+S++ Q + L 
Sbjct: 61  DILASGKAKARMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQKVLD 120

Query: 120 RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRM 179
           RGV +++ TPGR++D   R +I L +V  +V+DEAD ML+MGFI DVE I+  +   ++ 
Sbjct: 121 RGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKIRQT 180

Query: 180 LLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTE 239
           L FSAT+   I +LA  ++     ++++  Q      +Q+   + + +K E L +++  E
Sbjct: 181 LFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLLRRE 240

Query: 240 KEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATD 299
                 IFC  K DVD +   L+  G+    LHGDM Q  R + L+KFK  ++ ++V +D
Sbjct: 241 TVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMVCSD 300

Query: 300 VAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKI 359
           VAARGID+ +++HV NFD+P +PE Y+HRIGRTGRAG+ G A T   P + +  + I+ +
Sbjct: 301 VAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAIENL 360

Query: 360 AKTEIKREEVPDVKDI 375
               I  +   ++ D+
Sbjct: 361 LGKTIPPDPQLELSDV 376