Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  296 bits (757), Expect = 1e-84
 Identities = 159/372 (42%), Positives = 229/372 (61%), Gaps = 6/372 (1%)

Query: 4   FKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
           F++   + EIL A+ + G+   TPIQ++AIP +  G+ D++  AQTGTGKTAAF +PIL+
Sbjct: 3   FESFSFAPEILHAISECGYQKMTPIQKEAIPAIRRGQ-DVLASAQTGTGKTAAFALPILQ 61

Query: 64  TI-----DEHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIREL 118
            +     D    NT+ALILAPTREL  QVA+ I        ++V  VYGG  +D Q  ++
Sbjct: 62  KMFDSPSDTQRSNTRALILAPTRELVAQVADNIKQYSRYLPISVLTVYGGVKMDTQAAKV 121

Query: 119 RRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKR 178
           ++G  I+V TPGR+L+H+    + L NV ++VLDEAD ML+MGFI D+++IL+ V+ D++
Sbjct: 122 KKGADIIVATPGRLLEHLQACNLNLSNVDFLVLDEADRMLDMGFITDIQKILQQVNRDRQ 181

Query: 179 MLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDT 238
            LLFSAT   ++ +LA   + +  +I V +Q  T     Q  Y +  R K ELLS +I  
Sbjct: 182 NLLFSATFSSAVKQLANEMLVKPKLIAVDKQNTTAVTVSQVVYPVEQRRKRELLSELIGK 241

Query: 239 EKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVAT 298
           +     L+F  T+   D +   LN  G  +  +H +  Q  R + L +FK  K+  LVAT
Sbjct: 242 KNWQQVLVFTATREAADVLVKELNLDGIPSAVVHSEKAQGNRRRALREFKEGKVRALVAT 301

Query: 299 DVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQK 358
           +VAARG+DI +L +VVNFD+P   E YVHRIGRTGRAG+ G AI+ V   E R    I+K
Sbjct: 302 EVAARGLDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSREEERTLADIEK 361

Query: 359 IAKTEIKREEVP 370
           +   +I+R  +P
Sbjct: 362 LIGNKIRRITIP 373