Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  293 bits (750), Expect = 1e-83
 Identities = 160/379 (42%), Positives = 239/379 (63%), Gaps = 13/379 (3%)

Query: 4   FKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
           F +LGL  EIL A+ ++G+T PTPIQ+QAIP ++ G RD++  AQTGTGKTA F +PIL+
Sbjct: 3   FTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAG-RDLMACAQTGTGKTAGFTLPILQ 61

Query: 64  TIDEH----------SRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDR 113
            + +           +R  + LILAPTRELA+QV E + +      L    ++GG  ++ 
Sbjct: 62  LLSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMNP 121

Query: 114 QIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSV 173
           QI  L+RGV I+V  PGR+LDHI++RT+ L  +  +VLDEAD ML+MGFI D+ +IL  +
Sbjct: 122 QIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILALL 181

Query: 174 STD--KRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFEL 231
             +  ++ LLFSAT  D I +LA++++ +   I+V R+  T     Q    +    K ++
Sbjct: 182 PPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKDV 241

Query: 232 LSRIIDTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKK 291
           L  + +       LIF +TK   D ++ RL+++G  +  LHG+ TQ  R + L +FK  K
Sbjct: 242 LLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEGK 301

Query: 292 INVLVATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFR 351
           +  LVATD+AARGIDI+ L +VVN+++P   E YVHRIGRTGRAG +G AI+ V   E  
Sbjct: 302 LVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDERD 361

Query: 352 KFKYIQKIAKTEIKREEVP 370
             + I+++ K ++++E +P
Sbjct: 362 NLRSIERLIKKDLEKEVLP 380