Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 641 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  380 bits (977), Expect = e-110
 Identities = 207/548 (37%), Positives = 333/548 (60%), Gaps = 37/548 (6%)

Query: 1   MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
           +++F  LGLS+ IL+AL   G+  P+ IQ + IP+L+EGK D++G AQTGTGKTAAF +P
Sbjct: 5   VDTFAQLGLSEPILQALTDVGYETPSSIQAECIPLLMEGK-DLLGMAQTGTGKTAAFALP 63

Query: 61  ILETIDEHSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELR 119
           +L+ +D   R  QAL+LAPTRELAIQVAE      K     +V P+YGGQS+  Q+++L+
Sbjct: 64  LLQKLDVTQRFPQALVLAPTRELAIQVAEACQKYAKHLPGFHVLPIYGGQSLGIQLKQLQ 123

Query: 120 RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRM 179
           RG  +++GTPGR++DH+ R+++ L  +  +VLDEADEML MGFIDDVE IL+ +  +++ 
Sbjct: 124 RGAHVIIGTPGRVMDHLERKSLDLSRLKTLVLDEADEMLRMGFIDDVEWILEHIPAERQT 183

Query: 180 LLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTE 239
            LFSAT+P+ I ++A+ Y+R+   +K+K    T +   Q ++++    K + L+RI++ E
Sbjct: 184 ALFSATMPEQIRRVAQKYLRDPQEVKIKSATSTVSAIQQRYWQVSGLHKLDALTRIMEVE 243

Query: 240 KEF-YGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVAT 298
                 +IF +TK   +E+A +L  +GYAA  L+GDM QA RE+ +++ K   +++++AT
Sbjct: 244 DSLDAAIIFVRTKTATEELAQKLEARGYAAAALNGDMNQASRERVIEQLKSGGLDIVIAT 303

Query: 299 DVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQK 358
           DVAARGID+  ++HV+N+DIP + E+YVHRIGRTGRAG+ G AI FV P E R  + I+K
Sbjct: 304 DVAARGIDVPRVSHVINYDIPYDVEAYVHRIGRTGRAGRTGTAILFVSPREMRMLRTIEK 363

Query: 359 IAKTEIKREEVPDVKDIISAKKIKIISGIKEVLESGKYADCEKMASDLLEDAD--PQEVL 416
           + +  I    +P  +D+   +  +    + + LE+G+ +  E++ + + E+A+    EV 
Sbjct: 364 VTRQNISPLRLPTKQDVADRRVAQFKQQVIKTLEAGELSFFEEVVTQIEEEANVGAHEVA 423

Query: 417 SAVLKYALKDE---------------------LSESNYKKIGRGS--------QRSERSG 447
           +A+     K                         +  +++  RG         +R ER  
Sbjct: 424 AALAFLVQKSRPLLMPEKEVRSFEADSAEGRPERKERFERPERGERFERKERPERGERLE 483

Query: 448 RNDS---RGRRSFAPGENVRLFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKF 504
           R D+   +GR     G  VR  + +G+     PK +V  I+ ++D++ R I  + +F+++
Sbjct: 484 RTDAKKGKGRDLGNVGNMVRYRIEVGRNQGATPKDIVGCIANEADIQSRYIGHIALFDEY 543

Query: 505 SFVTVSSS 512
           S V +  S
Sbjct: 544 STVELPDS 551