Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 527 a.a., Probable ATP-dependent RNA helicase RhlE from Mycobacterium tuberculosis H37Rv

 Score =  300 bits (767), Expect = 1e-85
 Identities = 158/378 (41%), Positives = 238/378 (62%), Gaps = 23/378 (6%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           +F  LG+ DEI+ AL ++G   P  IQE  +P+ ++G+ D++GQA+TG GKT AFG+P+L
Sbjct: 11  TFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGE-DVIGQARTGMGKTFAFGVPLL 69

Query: 63  ETIDEHSRNT------QALILAPTRELAIQVAEEI--------------DSIKGSKRLNV 102
           + I             +AL++ PTREL +QV +++              D+    +RL+V
Sbjct: 70  QRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSV 129

Query: 103 FPVYGGQSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGF 162
             +YGG+  + QI  LR G  +VVGTPGR+LD   +  ++L  +S +VLDEADEML++GF
Sbjct: 130 VSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGF 189

Query: 163 IDDVEEILKSVSTDKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTT--LTDQSF 220
           + D+E IL+ +  D++ +LFSAT+PD I+ LA+ +M     I+ +    +     T+Q  
Sbjct: 190 LPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFV 249

Query: 221 YEIHSRDKFELLSRIIDTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQR 280
           Y  H+ DK EL+SR++        +IF +TK    +VA+ L E+G+A   +HGD+ Q  R
Sbjct: 250 YRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAR 309

Query: 281 EKTLDKFKGKKINVLVATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGY 340
           EK L  F+   I+VLVATDVAARGIDI+D+THV+N+  P++ + YVHRIGRTGRAG+ G 
Sbjct: 310 EKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGV 369

Query: 341 AITFVEPSEFRKFKYIQK 358
           A+T V+  E  ++  I +
Sbjct: 370 AVTLVDWDELPRWSMIDQ 387