Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 634 a.a., ATP-dependent RNA helicase DeaD from Enterobacter sp. TBS_079

 Score =  365 bits (937), Expect = e-105
 Identities = 217/552 (39%), Positives = 320/552 (57%), Gaps = 31/552 (5%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           +F +LGL   ILEAL   G+  P+PIQ + IP L+ G RD++G AQTG+GKTAAF +P+L
Sbjct: 7   TFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSG-RDVLGMAQTGSGKTAAFSLPLL 65

Query: 63  ETIDEHSRNTQALILAPTRELAIQVAEEI-DSIKGSKRLNVFPVYGGQSIDRQIRELRRG 121
             ID   R  Q L+LAPTRELA+QVAE + D  K  + +NV  +YGGQ  D Q+R LR+G
Sbjct: 66  HNIDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG 125

Query: 122 VQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRMLL 181
            QIVVGTPGR+LDH+ R T+ L  +S +VLDEADEML MGFI+DVE I+  +    +  L
Sbjct: 126 PQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTAL 185

Query: 182 FSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEKE 241
           FSAT+P++I ++ + +M+E   ++++    T     QS++ ++   K E L R ++ E  
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFLEAEDF 245

Query: 242 FYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDVA 301
              +IF +TK    EVA  L   GY +  L+GDM QA RE+TL++ K  ++++L+ATDVA
Sbjct: 246 DAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVA 305

Query: 302 ARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKIAK 361
           ARG+D+  ++ VVN+DIP + ESYVHRIGRTGRAG+ G A+ FVE  E R  + I++  K
Sbjct: 306 ARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMK 365

Query: 362 TEIKREEVPDVKDIISAKKIKIISGIKEVLES------------------GKYADCEKMA 403
             I   E+P+ + +   +  K  + +++ LES                  G+  D E +A
Sbjct: 366 LTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAQIQPTAEGEELDMETLA 425

Query: 404 SDLLEDAD--------PQEVLSAVLKYALKDELSESNYKKIGRG--SQRSERSGRNDSRG 453
           + LL+ A         P   +    ++  +DE  E    +  RG  + R ERSG    R 
Sbjct: 426 AALLKMAQGERTLIVPPDAPMRPKREFRDRDERFERRGDRNDRGPRADRPERSGEERPRR 485

Query: 454 RRSFAPGENVRLFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSD 513
            R  A GE     + +G+ D +  + +V  I+ + D+  R I ++K+F   S + +    
Sbjct: 486 ERRDA-GEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGM 544

Query: 514 AEIILDSFKNER 525
              +L  F   R
Sbjct: 545 PGEVLQHFTRTR 556