Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 619 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  353 bits (906), Expect = e-101
 Identities = 198/544 (36%), Positives = 317/544 (58%), Gaps = 23/544 (4%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           +F+ LGLS+ +L AL++ G+ NPTPIQ  +I  L+ GK DI+GQAQTGTGKT AF +P+L
Sbjct: 7   TFRELGLSENLLRALDELGYENPTPIQSASIDPLMAGK-DILGQAQTGTGKTGAFALPLL 65

Query: 63  ETIDEHSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELRRG 121
             +   +   Q L+LAPTRELA+QVAE   S  K  K  +V P+YGGQS+ +Q+  L+RG
Sbjct: 66  NKVTSQAV-PQILVLAPTRELAVQVAEAFSSYAKFMKGFHVLPIYGGQSMHQQLNALKRG 124

Query: 122 VQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRMLL 181
            Q++VGTPGR++DH+ R T+KLE +  +VLDEADEML MGFIDD+E IL+     +++ L
Sbjct: 125 PQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPEQRQLAL 184

Query: 182 FSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEKE 241
           FSAT+P+ I ++A  ++++   I +     T    +Q F ++   +K E L R+++ E  
Sbjct: 185 FSATMPEQIKRVANKHLKDATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVENT 244

Query: 242 FYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDVA 301
              +IF +T+    E+A +L  +GYA+  LHGDM Q  RE+ +++ K  K+++L+ATDVA
Sbjct: 245 EGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKSGKLDILIATDVA 304

Query: 302 ARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKIAK 361
           ARG+D+  + HVVN+DIP + E+YVHRIGRTGRAG+ G AI FV   E R  + I++   
Sbjct: 305 ARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATN 364

Query: 362 TEIKREEVPDVKDIISAKKIKIISGIKEVLESG--------------KYADCEKMASDLL 407
           + I   +VP  + +   +  ++   + + +                    D + +A+ LL
Sbjct: 365 SRISPMKVPSPETVAERRLSRLGEQLAQTMTQDLDFMREAVAQLCQQLEVDTDLLAAALL 424

Query: 408 EDADPQEVLS-AVLKYALKDELSESNYKKIGRGSQRSERSGRNDSRGRRSFAPGEN---- 462
                +  L    ++   +DE SE   ++  RG +RS  S    +    + A  +N    
Sbjct: 425 HQVQQERPLQLPAIQERTRDERSERGAERGERGERRSRESRPMPASLGSAEALKDNPDLK 484

Query: 463 -VRLFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEIILDSF 521
             R  + +G+ + +    +V  I+ ++++  R I  +++++  + V +     + +L   
Sbjct: 485 MCRYVIDVGRDNGVGVGNIVGAIANEANIDSRYIGAIQLYDAVTTVDLPDGMPKEVLQHL 544

Query: 522 KNER 525
           K  R
Sbjct: 545 KKVR 548