Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  297 bits (760), Expect = 6e-85
 Identities = 156/374 (41%), Positives = 233/374 (62%), Gaps = 7/374 (1%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           SF  L L  +++  L + G+  PTPIQ +AIP ++  K+D++  AQTGTGKTAAF +PIL
Sbjct: 2   SFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAIL-AKQDVMAGAQTGTGKTAAFALPIL 60

Query: 63  ET--IDEHS----RNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIR 116
           +   ID  S    ++ +AL+L PTRELA+QV +          + V   YGG SI+ Q  
Sbjct: 61  QQLLIDNESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQA 120

Query: 117 ELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTD 176
           E + G+ +++ TPGR+LDH+ +  + L+ +S +V DEAD ML+MGF+D+++ +LK V   
Sbjct: 121 EFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLKQVPAQ 180

Query: 177 KRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRII 236
           ++ LLFSATL DSI   +KN +R+  +I+V ++  T    +Q  Y I S  K E +S ++
Sbjct: 181 RQTLLFSATLDDSIFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDSDRKTEFVSHLV 240

Query: 237 DTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLV 296
            ++     LIF +TK  VD++  +LN+ G A +  HGD++Q  REK L  FK   + VLV
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGLVQVLV 300

Query: 297 ATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYI 356
           ATDVAARG+DI DL +V+NF++P   E Y+HRIGRTGRAG  G AIT     +    + +
Sbjct: 301 ATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360

Query: 357 QKIAKTEIKREEVP 370
           + +    + ++  P
Sbjct: 361 EALLDKRLPQQWYP 374