Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas fluorescens FW300-N2E2

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 11/147 (7%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPE---WLNE---- 80
           +   ++LY   LRV+EL+++ ++ +NL +GV +++   ++   + +  E   W+      
Sbjct: 137 RAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRD 196

Query: 81  ---DIFGHIVDNNLKDDDRLFKFKNRTYAWELVKKYTKDAKIHKEFSTHTFRRSRALHLL 137
              ++ G    + L    R  +   +T+ W  +K   K A I+K  S HT R + A HLL
Sbjct: 197 ARHELLGGRPSDVLFPSLRGEQMTRQTF-WHRIKHQAKVAGINKSLSPHTLRHAFATHLL 255

Query: 138 NDGVPLEKVSKYLRHKSINTTMHYLKI 164
           N G  L  V   L H  ++TT  Y  +
Sbjct: 256 NHGADLRVVQMLLGHSDLSTTQIYTHV 282