Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 5e-11
 Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 19/167 (11%)

Query: 10  LTKDELKLFIDTVD----SKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTK 65
           L  DE+   ++  D    S   +   +++YG  LR++EL++I++K++NL+EG  +++   
Sbjct: 123 LDVDEMAQLLEVTDDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKG 182

Query: 66  TENFQICV---IPEWLNE--DIFGHIVDNNLKDDDRLF------KFKNRTYAWELVKKYT 114
            +  ++       EW+ +   +   + D+    +  LF      +  +R+    + +   
Sbjct: 183 NKERKVWFAGQAQEWVGKWLKLRSQLADS---AETALFVSKLGTRISHRSVQKRMAEWGQ 239

Query: 115 KDAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHY 161
           K A +    S H  R S A H+L     L  V + L H++I TT  Y
Sbjct: 240 KQA-VASHISPHKLRHSFATHMLESSNNLRAVQELLGHENIATTQIY 285