Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 407 a.a., site-specific integrase from Parabacteroides merdae CL09T00C40

 Score = 50.1 bits (118), Expect = 5e-11
 Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 11/175 (6%)

Query: 7   KDWLTKDELKLFI----DTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLL 62
           KD L+ +E++  +    D  +    + F   LY   LR  ++  +  +N++    + K  
Sbjct: 229 KDVLSLEEIQKLMACHYDNENPIVRRTFIFCLY-CGLRFCDVKDLTYRNVDYANRLLKFE 287

Query: 63  DTKTENFQIC---VIPEWLNEDIFGHIVDNNLKDDDRLFKFKNRTYAWELVKKYTKDAKI 119
            +KT+        VIP  LN+ +   I +     +  +F         + VK++ K A I
Sbjct: 288 QSKTKGHSASSGVVIP--LNDGLLSIIGEAPADKNCLIFDLPTYESCCKSVKRWVKRAGI 345

Query: 120 HKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKKELV 174
            K  S H  R S A+++LN+G  ++ V+  L H  +  T  Y +  VD +K+E +
Sbjct: 346 DKHISWHCARHSFAVNILNNGANIKTVASLLGHSGLKHTEKYTR-AVDKLKEEAI 399